Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
S1PR3Q99500 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
S1PR3Q99500 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
S1PR3Q99500 AC093484.2-201ENST00000580996 2166 ntBASIC16.09■□□□□ 0.17
S1PR3Q99500 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
S1PR3Q99500 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
S1PR3Q99500 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
S1PR3Q99500 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.08■□□□□ 0.17
S1PR3Q99500 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
S1PR3Q99500 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
S1PR3Q99500 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
S1PR3Q99500 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
S1PR3Q99500 AC005332.7-201ENST00000614046 2005 ntBASIC16.08■□□□□ 0.16
S1PR3Q99500 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.08■□□□□ 0.16
S1PR3Q99500 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
S1PR3Q99500 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
S1PR3Q99500 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.08■□□□□ 0.16
S1PR3Q99500 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
S1PR3Q99500 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.08■□□□□ 0.16
S1PR3Q99500 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.08■□□□□ 0.16
S1PR3Q99500 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.08■□□□□ 0.16
S1PR3Q99500 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.08■□□□□ 0.16
S1PR3Q99500 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.08■□□□□ 0.16
S1PR3Q99500 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
S1PR3Q99500 AC005829.2-201ENST00000571422 1056 ntBASIC16.08■□□□□ 0.16
S1PR3Q99500 MYC-209ENST00000641252 345 ntBASIC16.08■□□□□ 0.16
S1PR3Q99500 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
S1PR3Q99500 AC087289.5-201ENST00000586076 3175 ntBASIC16.08■□□□□ 0.16
S1PR3Q99500 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
S1PR3Q99500 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.08■□□□□ 0.16
S1PR3Q99500 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
S1PR3Q99500 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
S1PR3Q99500 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
S1PR3Q99500 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
S1PR3Q99500 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
S1PR3Q99500 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.07■□□□□ 0.16
S1PR3Q99500 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.07■□□□□ 0.16
S1PR3Q99500 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
S1PR3Q99500 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.07■□□□□ 0.16
S1PR3Q99500 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
S1PR3Q99500 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.07■□□□□ 0.16
S1PR3Q99500 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
S1PR3Q99500 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
S1PR3Q99500 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.07■□□□□ 0.16
S1PR3Q99500 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
S1PR3Q99500 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.07■□□□□ 0.16
S1PR3Q99500 AC018445.3-201ENST00000624177 1945 ntBASIC16.07■□□□□ 0.16
S1PR3Q99500 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
S1PR3Q99500 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
S1PR3Q99500 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
S1PR3Q99500 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
S1PR3Q99500 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
S1PR3Q99500 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
S1PR3Q99500 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
S1PR3Q99500 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
S1PR3Q99500 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
S1PR3Q99500 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
S1PR3Q99500 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
S1PR3Q99500 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
S1PR3Q99500 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
S1PR3Q99500 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.06■□□□□ 0.16
S1PR3Q99500 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
S1PR3Q99500 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.06■□□□□ 0.16
S1PR3Q99500 AC018553.1-201ENST00000616682 1458 ntBASIC16.06■□□□□ 0.16
S1PR3Q99500 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
S1PR3Q99500 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
S1PR3Q99500 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
S1PR3Q99500 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
S1PR3Q99500 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
S1PR3Q99500 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.06■□□□□ 0.16
S1PR3Q99500 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
S1PR3Q99500 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.06■□□□□ 0.16
S1PR3Q99500 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
S1PR3Q99500 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
S1PR3Q99500 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
S1PR3Q99500 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
S1PR3Q99500 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
S1PR3Q99500 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
S1PR3Q99500 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
S1PR3Q99500 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
S1PR3Q99500 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
S1PR3Q99500 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
S1PR3Q99500 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
S1PR3Q99500 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
S1PR3Q99500 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.05■□□□□ 0.16
S1PR3Q99500 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.05■□□□□ 0.16
S1PR3Q99500 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
S1PR3Q99500 AC116351.2-201ENST00000606540 1585 ntBASIC16.05■□□□□ 0.16
S1PR3Q99500 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
S1PR3Q99500 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.05■□□□□ 0.16
S1PR3Q99500 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
S1PR3Q99500 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
S1PR3Q99500 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
S1PR3Q99500 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
S1PR3Q99500 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
S1PR3Q99500 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
S1PR3Q99500 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.05■□□□□ 0.16
S1PR3Q99500 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.05■□□□□ 0.16
S1PR3Q99500 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
S1PR3Q99500 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms