Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLPTM1LQ96KA5 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLPTM1LQ96KA5 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.72■□□□□ 0.59
CLPTM1LQ96KA5 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLPTM1LQ96KA5 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLPTM1LQ96KA5 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLPTM1LQ96KA5 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLPTM1LQ96KA5 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLPTM1LQ96KA5 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.72■□□□□ 0.59
CLPTM1LQ96KA5 AC027682.1-201ENST00000562846 899 ntBASIC18.72■□□□□ 0.59
CLPTM1LQ96KA5 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.72■□□□□ 0.59
CLPTM1LQ96KA5 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.72■□□□□ 0.59
CLPTM1LQ96KA5 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLPTM1LQ96KA5 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLPTM1LQ96KA5 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CLPTM1LQ96KA5 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLPTM1LQ96KA5 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLPTM1LQ96KA5 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLPTM1LQ96KA5 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
CLPTM1LQ96KA5 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLPTM1LQ96KA5 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLPTM1LQ96KA5 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLPTM1LQ96KA5 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CLPTM1LQ96KA5 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLPTM1LQ96KA5 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLPTM1LQ96KA5 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CLPTM1LQ96KA5 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLPTM1LQ96KA5 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.71■□□□□ 0.59
CLPTM1LQ96KA5 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.71■□□□□ 0.59
CLPTM1LQ96KA5 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.71■□□□□ 0.59
CLPTM1LQ96KA5 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
CLPTM1LQ96KA5 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CLPTM1LQ96KA5 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.71■□□□□ 0.59
CLPTM1LQ96KA5 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLPTM1LQ96KA5 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLPTM1LQ96KA5 KRT16P6-202ENST00000425692 1426 ntBASIC18.71■□□□□ 0.59
CLPTM1LQ96KA5 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLPTM1LQ96KA5 AC012313.1-201ENST00000593393 3059 ntBASIC18.71■□□□□ 0.59
CLPTM1LQ96KA5 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLPTM1LQ96KA5 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLPTM1LQ96KA5 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLPTM1LQ96KA5 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
CLPTM1LQ96KA5 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CLPTM1LQ96KA5 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.7■□□□□ 0.58
CLPTM1LQ96KA5 AC141586.3-201ENST00000562166 1838 ntBASIC18.7■□□□□ 0.58
CLPTM1LQ96KA5 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLPTM1LQ96KA5 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLPTM1LQ96KA5 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLPTM1LQ96KA5 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLPTM1LQ96KA5 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.7■□□□□ 0.58
CLPTM1LQ96KA5 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.7■□□□□ 0.58
CLPTM1LQ96KA5 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.7■□□□□ 0.58
CLPTM1LQ96KA5 AC243732.1-201ENST00000612648 864 ntBASIC18.7■□□□□ 0.58
CLPTM1LQ96KA5 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CLPTM1LQ96KA5 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLPTM1LQ96KA5 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLPTM1LQ96KA5 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLPTM1LQ96KA5 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLPTM1LQ96KA5 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLPTM1LQ96KA5 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLPTM1LQ96KA5 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLPTM1LQ96KA5 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLPTM1LQ96KA5 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
CLPTM1LQ96KA5 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLPTM1LQ96KA5 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLPTM1LQ96KA5 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.69■□□□□ 0.58
CLPTM1LQ96KA5 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLPTM1LQ96KA5 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CLPTM1LQ96KA5 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLPTM1LQ96KA5 AC087633.2-202ENST00000565166 1439 ntBASIC18.69■□□□□ 0.58
CLPTM1LQ96KA5 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLPTM1LQ96KA5 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLPTM1LQ96KA5 AC020916.1-201ENST00000587762 1774 ntBASIC18.69■□□□□ 0.58
CLPTM1LQ96KA5 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
CLPTM1LQ96KA5 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.69■□□□□ 0.58
CLPTM1LQ96KA5 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.69■□□□□ 0.58
CLPTM1LQ96KA5 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLPTM1LQ96KA5 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CLPTM1LQ96KA5 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
CLPTM1LQ96KA5 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.69■□□□□ 0.58
CLPTM1LQ96KA5 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLPTM1LQ96KA5 DUX4L2-201ENST00000561772 1275 ntBASIC18.69■□□□□ 0.58
CLPTM1LQ96KA5 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.69■□□□□ 0.58
CLPTM1LQ96KA5 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLPTM1LQ96KA5 DUX4L6-201ENST00000626483 1275 ntBASIC18.69■□□□□ 0.58
CLPTM1LQ96KA5 DUX4L1-201ENST00000627662 1275 ntBASIC18.69■□□□□ 0.58
CLPTM1LQ96KA5 DUX4L8-201ENST00000629013 1275 ntBASIC18.69■□□□□ 0.58
CLPTM1LQ96KA5 DUX4L3-201ENST00000630187 1275 ntBASIC18.69■□□□□ 0.58
CLPTM1LQ96KA5 DUX4L7-201ENST00000630678 1275 ntBASIC18.69■□□□□ 0.58
CLPTM1LQ96KA5 DUX4L5-201ENST00000630834 1275 ntBASIC18.69■□□□□ 0.58
CLPTM1LQ96KA5 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLPTM1LQ96KA5 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.69■□□□□ 0.58
CLPTM1LQ96KA5 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLPTM1LQ96KA5 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.69■□□□□ 0.58
CLPTM1LQ96KA5 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLPTM1LQ96KA5 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLPTM1LQ96KA5 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLPTM1LQ96KA5 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
CLPTM1LQ96KA5 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLPTM1LQ96KA5 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms