Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.56■□□□□ 0.4
LRRC46Q96FV0 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC46Q96FV0 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.56■□□□□ 0.4
LRRC46Q96FV0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC46Q96FV0 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC46Q96FV0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC46Q96FV0 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC46Q96FV0 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.55■□□□□ 0.4
LRRC46Q96FV0 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.55■□□□□ 0.4
LRRC46Q96FV0 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC46Q96FV0 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LRRC46Q96FV0 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC46Q96FV0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
LRRC46Q96FV0 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC46Q96FV0 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC46Q96FV0 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
LRRC46Q96FV0 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.55■□□□□ 0.4
LRRC46Q96FV0 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
LRRC46Q96FV0 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.55■□□□□ 0.4
LRRC46Q96FV0 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC46Q96FV0 AL355075.4-201ENST00000554988 638 ntBASIC17.55■□□□□ 0.4
LRRC46Q96FV0 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.55■□□□□ 0.4
LRRC46Q96FV0 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC46Q96FV0 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC46Q96FV0 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LRRC46Q96FV0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC46Q96FV0 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC46Q96FV0 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC46Q96FV0 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC46Q96FV0 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.55■□□□□ 0.4
LRRC46Q96FV0 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC46Q96FV0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC46Q96FV0 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC46Q96FV0 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC46Q96FV0 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.54■□□□□ 0.4
LRRC46Q96FV0 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
LRRC46Q96FV0 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC46Q96FV0 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.54■□□□□ 0.4
LRRC46Q96FV0 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC46Q96FV0 MMP23A-201ENST00000234610 1017 ntBASIC17.54■□□□□ 0.4
LRRC46Q96FV0 KRT18P21-201ENST00000515767 1272 ntBASIC17.54■□□□□ 0.4
LRRC46Q96FV0 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
LRRC46Q96FV0 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.54■□□□□ 0.4
LRRC46Q96FV0 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.54■□□□□ 0.4
LRRC46Q96FV0 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.54■□□□□ 0.4
LRRC46Q96FV0 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.54■□□□□ 0.4
LRRC46Q96FV0 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.54■□□□□ 0.4
LRRC46Q96FV0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC46Q96FV0 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC46Q96FV0 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC46Q96FV0 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.54■□□□□ 0.4
LRRC46Q96FV0 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
LRRC46Q96FV0 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC46Q96FV0 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC46Q96FV0 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC46Q96FV0 LETM1P2-201ENST00000597330 2178 ntBASIC17.53■□□□□ 0.4
LRRC46Q96FV0 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC46Q96FV0 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
LRRC46Q96FV0 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC46Q96FV0 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.53■□□□□ 0.4
LRRC46Q96FV0 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.53■□□□□ 0.4
LRRC46Q96FV0 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
LRRC46Q96FV0 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.53■□□□□ 0.4
LRRC46Q96FV0 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.53■□□□□ 0.4
LRRC46Q96FV0 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.53■□□□□ 0.4
LRRC46Q96FV0 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.53■□□□□ 0.4
LRRC46Q96FV0 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.53■□□□□ 0.4
LRRC46Q96FV0 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.53■□□□□ 0.4
LRRC46Q96FV0 AL031963.3-201ENST00000606441 850 ntBASIC17.53■□□□□ 0.4
LRRC46Q96FV0 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.53■□□□□ 0.4
LRRC46Q96FV0 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.53■□□□□ 0.4
LRRC46Q96FV0 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC46Q96FV0 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
LRRC46Q96FV0 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC46Q96FV0 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC46Q96FV0 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC46Q96FV0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC46Q96FV0 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC46Q96FV0 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
LRRC46Q96FV0 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.53■□□□□ 0.4
LRRC46Q96FV0 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC46Q96FV0 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC46Q96FV0 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC46Q96FV0 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
LRRC46Q96FV0 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.52■□□□□ 0.4
LRRC46Q96FV0 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.52■□□□□ 0.4
LRRC46Q96FV0 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.52■□□□□ 0.4
LRRC46Q96FV0 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.52■□□□□ 0.4
LRRC46Q96FV0 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.52■□□□□ 0.4
LRRC46Q96FV0 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.52■□□□□ 0.4
LRRC46Q96FV0 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.52■□□□□ 0.4
LRRC46Q96FV0 AL353708.3-201ENST00000610272 989 ntBASIC17.52■□□□□ 0.4
LRRC46Q96FV0 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC46Q96FV0 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
LRRC46Q96FV0 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
LRRC46Q96FV0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
LRRC46Q96FV0 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.52■□□□□ 0.39
LRRC46Q96FV0 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
LRRC46Q96FV0 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
LRRC46Q96FV0 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms