Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC47A1Q96FL8 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC47A1Q96FL8 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC47A1Q96FL8 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC47A1Q96FL8 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SLC47A1Q96FL8 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC47A1Q96FL8 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.37■□□□□ 0.53
SLC47A1Q96FL8 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC47A1Q96FL8 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC47A1Q96FL8 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.37■□□□□ 0.53
SLC47A1Q96FL8 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC47A1Q96FL8 AC069236.1-201ENST00000604339 616 ntBASIC18.37■□□□□ 0.53
SLC47A1Q96FL8 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.37■□□□□ 0.53
SLC47A1Q96FL8 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.37■□□□□ 0.53
SLC47A1Q96FL8 AC008694.1-202ENST00000636953 945 ntBASIC18.37■□□□□ 0.53
SLC47A1Q96FL8 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC47A1Q96FL8 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC47A1Q96FL8 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC47A1Q96FL8 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC47A1Q96FL8 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC47A1Q96FL8 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC47A1Q96FL8 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SLC47A1Q96FL8 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC47A1Q96FL8 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.37■□□□□ 0.53
SLC47A1Q96FL8 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC47A1Q96FL8 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SLC47A1Q96FL8 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC47A1Q96FL8 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.36■□□□□ 0.53
SLC47A1Q96FL8 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC47A1Q96FL8 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC47A1Q96FL8 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC47A1Q96FL8 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC47A1Q96FL8 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC47A1Q96FL8 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.36■□□□□ 0.53
SLC47A1Q96FL8 CROCCP3-202ENST00000420820 1947 ntBASIC18.36■□□□□ 0.53
SLC47A1Q96FL8 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC47A1Q96FL8 AC007322.1-201ENST00000426983 750 ntBASIC18.36■□□□□ 0.53
SLC47A1Q96FL8 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC47A1Q96FL8 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC47A1Q96FL8 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.36■□□□□ 0.53
SLC47A1Q96FL8 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.36■□□□□ 0.53
SLC47A1Q96FL8 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.36■□□□□ 0.53
SLC47A1Q96FL8 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SLC47A1Q96FL8 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC47A1Q96FL8 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SLC47A1Q96FL8 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.36■□□□□ 0.53
SLC47A1Q96FL8 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.36■□□□□ 0.53
SLC47A1Q96FL8 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.36■□□□□ 0.53
SLC47A1Q96FL8 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.36■□□□□ 0.53
SLC47A1Q96FL8 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.36■□□□□ 0.53
SLC47A1Q96FL8 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
SLC47A1Q96FL8 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
SLC47A1Q96FL8 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC47A1Q96FL8 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC47A1Q96FL8 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC47A1Q96FL8 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC47A1Q96FL8 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SLC47A1Q96FL8 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SLC47A1Q96FL8 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC47A1Q96FL8 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC47A1Q96FL8 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.35■□□□□ 0.53
SLC47A1Q96FL8 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC47A1Q96FL8 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SLC47A1Q96FL8 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC47A1Q96FL8 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC47A1Q96FL8 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC47A1Q96FL8 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SLC47A1Q96FL8 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC47A1Q96FL8 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC47A1Q96FL8 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC47A1Q96FL8 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC47A1Q96FL8 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.35■□□□□ 0.53
SLC47A1Q96FL8 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.35■□□□□ 0.53
SLC47A1Q96FL8 HCG11-201ENST00000411553 5696 ntBASIC18.35■□□□□ 0.53
SLC47A1Q96FL8 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
SLC47A1Q96FL8 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.35■□□□□ 0.53
SLC47A1Q96FL8 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC47A1Q96FL8 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC47A1Q96FL8 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC47A1Q96FL8 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SLC47A1Q96FL8 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC47A1Q96FL8 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC47A1Q96FL8 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC47A1Q96FL8 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC47A1Q96FL8 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SLC47A1Q96FL8 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC47A1Q96FL8 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
SLC47A1Q96FL8 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC47A1Q96FL8 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC47A1Q96FL8 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC47A1Q96FL8 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC47A1Q96FL8 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC47A1Q96FL8 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC47A1Q96FL8 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SLC47A1Q96FL8 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC47A1Q96FL8 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC47A1Q96FL8 PHGDH-210ENST00000641115 1638 ntBASIC18.34■□□□□ 0.53
SLC47A1Q96FL8 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC47A1Q96FL8 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC47A1Q96FL8 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms