Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTHRC1Q96CG8 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.12■□□□□ 0.49
CTHRC1Q96CG8 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.12■□□□□ 0.49
CTHRC1Q96CG8 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTHRC1Q96CG8 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTHRC1Q96CG8 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTHRC1Q96CG8 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.12■□□□□ 0.49
CTHRC1Q96CG8 AC116562.4-201ENST00000641316 2276 ntBASIC18.12■□□□□ 0.49
CTHRC1Q96CG8 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CTHRC1Q96CG8 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.12■□□□□ 0.49
CTHRC1Q96CG8 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTHRC1Q96CG8 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTHRC1Q96CG8 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTHRC1Q96CG8 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTHRC1Q96CG8 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
CTHRC1Q96CG8 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.11■□□□□ 0.49
CTHRC1Q96CG8 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTHRC1Q96CG8 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.11■□□□□ 0.49
CTHRC1Q96CG8 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CTHRC1Q96CG8 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CTHRC1Q96CG8 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CTHRC1Q96CG8 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTHRC1Q96CG8 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTHRC1Q96CG8 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CTHRC1Q96CG8 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CTHRC1Q96CG8 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CTHRC1Q96CG8 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.11■□□□□ 0.49
CTHRC1Q96CG8 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.11■□□□□ 0.49
CTHRC1Q96CG8 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CTHRC1Q96CG8 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTHRC1Q96CG8 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.11■□□□□ 0.49
CTHRC1Q96CG8 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.11■□□□□ 0.49
CTHRC1Q96CG8 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTHRC1Q96CG8 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CTHRC1Q96CG8 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.11■□□□□ 0.49
CTHRC1Q96CG8 AC104417.2-201ENST00000562989 1793 ntBASIC18.11■□□□□ 0.49
CTHRC1Q96CG8 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.11■□□□□ 0.49
CTHRC1Q96CG8 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTHRC1Q96CG8 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
CTHRC1Q96CG8 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CTHRC1Q96CG8 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTHRC1Q96CG8 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CTHRC1Q96CG8 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTHRC1Q96CG8 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTHRC1Q96CG8 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTHRC1Q96CG8 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTHRC1Q96CG8 AC005332.7-201ENST00000614046 2005 ntBASIC18.1■□□□□ 0.49
CTHRC1Q96CG8 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTHRC1Q96CG8 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.1■□□□□ 0.49
CTHRC1Q96CG8 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CTHRC1Q96CG8 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.1■□□□□ 0.49
CTHRC1Q96CG8 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.1■□□□□ 0.49
CTHRC1Q96CG8 GCSHP5-201ENST00000443090 522 ntBASIC18.1■□□□□ 0.49
CTHRC1Q96CG8 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.1■□□□□ 0.49
CTHRC1Q96CG8 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.1■□□□□ 0.49
CTHRC1Q96CG8 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CTHRC1Q96CG8 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.1■□□□□ 0.49
CTHRC1Q96CG8 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTHRC1Q96CG8 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.1■□□□□ 0.49
CTHRC1Q96CG8 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CTHRC1Q96CG8 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CTHRC1Q96CG8 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
CTHRC1Q96CG8 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTHRC1Q96CG8 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTHRC1Q96CG8 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTHRC1Q96CG8 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTHRC1Q96CG8 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.09■□□□□ 0.49
CTHRC1Q96CG8 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.09■□□□□ 0.49
CTHRC1Q96CG8 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
CTHRC1Q96CG8 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.09■□□□□ 0.49
CTHRC1Q96CG8 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.09■□□□□ 0.49
CTHRC1Q96CG8 HLA-A-209ENST00000638375 975 ntBASIC18.09■□□□□ 0.49
CTHRC1Q96CG8 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTHRC1Q96CG8 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CTHRC1Q96CG8 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.09■□□□□ 0.49
CTHRC1Q96CG8 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTHRC1Q96CG8 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTHRC1Q96CG8 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.09■□□□□ 0.49
CTHRC1Q96CG8 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
CTHRC1Q96CG8 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.08■□□□□ 0.49
CTHRC1Q96CG8 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.08■□□□□ 0.49
CTHRC1Q96CG8 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CTHRC1Q96CG8 AC007952.6-201ENST00000573168 2673 ntBASIC18.08■□□□□ 0.49
CTHRC1Q96CG8 AC003957.1-201ENST00000625108 2673 ntBASIC18.08■□□□□ 0.49
CTHRC1Q96CG8 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
CTHRC1Q96CG8 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.08■□□□□ 0.49
CTHRC1Q96CG8 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTHRC1Q96CG8 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTHRC1Q96CG8 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTHRC1Q96CG8 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.08■□□□□ 0.48
CTHRC1Q96CG8 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTHRC1Q96CG8 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.08■□□□□ 0.48
CTHRC1Q96CG8 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CTHRC1Q96CG8 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.08■□□□□ 0.48
CTHRC1Q96CG8 AC142381.4-202ENST00000563973 229 ntBASIC18.08■□□□□ 0.48
CTHRC1Q96CG8 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.08■□□□□ 0.48
CTHRC1Q96CG8 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.08■□□□□ 0.48
CTHRC1Q96CG8 AL353708.3-201ENST00000610272 989 ntBASIC18.08■□□□□ 0.48
CTHRC1Q96CG8 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTHRC1Q96CG8 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms