Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TMEM54Q969K7 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TMEM54Q969K7 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
TMEM54Q969K7 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
TMEM54Q969K7 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TMEM54Q969K7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM54Q969K7 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.2■□□□□ 0.34
TMEM54Q969K7 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TMEM54Q969K7 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.2■□□□□ 0.34
TMEM54Q969K7 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM54Q969K7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM54Q969K7 AC005332.7-201ENST00000614046 2005 ntBASIC17.2■□□□□ 0.34
TMEM54Q969K7 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM54Q969K7 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.2■□□□□ 0.34
TMEM54Q969K7 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM54Q969K7 TSPY20P-201ENST00000450910 630 ntBASIC17.2■□□□□ 0.34
TMEM54Q969K7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.2■□□□□ 0.34
TMEM54Q969K7 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
TMEM54Q969K7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.2■□□□□ 0.34
TMEM54Q969K7 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM54Q969K7 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM54Q969K7 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM54Q969K7 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.2■□□□□ 0.34
TMEM54Q969K7 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM54Q969K7 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.2■□□□□ 0.34
TMEM54Q969K7 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM54Q969K7 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM54Q969K7 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM54Q969K7 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM54Q969K7 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.19■□□□□ 0.34
TMEM54Q969K7 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TMEM54Q969K7 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TMEM54Q969K7 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM54Q969K7 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.19■□□□□ 0.34
TMEM54Q969K7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM54Q969K7 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.19■□□□□ 0.34
TMEM54Q969K7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.19■□□□□ 0.34
TMEM54Q969K7 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.19■□□□□ 0.34
TMEM54Q969K7 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.19■□□□□ 0.34
TMEM54Q969K7 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TMEM54Q969K7 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.19■□□□□ 0.34
TMEM54Q969K7 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
TMEM54Q969K7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM54Q969K7 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.19■□□□□ 0.34
TMEM54Q969K7 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM54Q969K7 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.19■□□□□ 0.34
TMEM54Q969K7 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.19■□□□□ 0.34
TMEM54Q969K7 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
TMEM54Q969K7 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM54Q969K7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM54Q969K7 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.18■□□□□ 0.34
TMEM54Q969K7 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM54Q969K7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM54Q969K7 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM54Q969K7 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TMEM54Q969K7 KRT16P5-201ENST00000455284 522 ntBASIC17.18■□□□□ 0.34
TMEM54Q969K7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.18■□□□□ 0.34
TMEM54Q969K7 C1QL1P1-201ENST00000568105 661 ntBASIC17.18■□□□□ 0.34
TMEM54Q969K7 AC110285.5-201ENST00000611501 352 ntBASIC17.18■□□□□ 0.34
TMEM54Q969K7 ITM2C-210ENST00000620962 501 ntBASIC17.18■□□□□ 0.34
TMEM54Q969K7 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM54Q969K7 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.18■□□□□ 0.34
TMEM54Q969K7 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.18■□□□□ 0.34
TMEM54Q969K7 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM54Q969K7 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM54Q969K7 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM54Q969K7 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM54Q969K7 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM54Q969K7 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM54Q969K7 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
TMEM54Q969K7 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM54Q969K7 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TMEM54Q969K7 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.17■□□□□ 0.34
TMEM54Q969K7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM54Q969K7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TMEM54Q969K7 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM54Q969K7 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM54Q969K7 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM54Q969K7 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM54Q969K7 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TMEM54Q969K7 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
TMEM54Q969K7 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
TMEM54Q969K7 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TMEM54Q969K7 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM54Q969K7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.17■□□□□ 0.34
TMEM54Q969K7 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.17■□□□□ 0.34
TMEM54Q969K7 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.17■□□□□ 0.34
TMEM54Q969K7 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM54Q969K7 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.17■□□□□ 0.34
TMEM54Q969K7 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.17■□□□□ 0.34
TMEM54Q969K7 AC104417.2-201ENST00000562989 1793 ntBASIC17.17■□□□□ 0.34
TMEM54Q969K7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.17■□□□□ 0.34
TMEM54Q969K7 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM54Q969K7 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM54Q969K7 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM54Q969K7 AC007952.6-201ENST00000573168 2673 ntBASIC17.16■□□□□ 0.34
TMEM54Q969K7 AC003957.1-201ENST00000625108 2673 ntBASIC17.16■□□□□ 0.34
TMEM54Q969K7 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.16■□□□□ 0.34
TMEM54Q969K7 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM54Q969K7 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms