Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.19■□□□□ 0.34
AP3S1Q92572 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.19■□□□□ 0.34
AP3S1Q92572 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
AP3S1Q92572 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.19■□□□□ 0.34
AP3S1Q92572 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
AP3S1Q92572 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
AP3S1Q92572 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
AP3S1Q92572 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
AP3S1Q92572 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP3S1Q92572 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.19■□□□□ 0.34
AP3S1Q92572 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP3S1Q92572 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
AP3S1Q92572 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.19■□□□□ 0.34
AP3S1Q92572 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.18■□□□□ 0.34
AP3S1Q92572 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
AP3S1Q92572 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
AP3S1Q92572 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.18■□□□□ 0.34
AP3S1Q92572 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.18■□□□□ 0.34
AP3S1Q92572 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
AP3S1Q92572 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
AP3S1Q92572 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.18■□□□□ 0.34
AP3S1Q92572 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
AP3S1Q92572 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.18■□□□□ 0.34
AP3S1Q92572 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
AP3S1Q92572 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.18■□□□□ 0.34
AP3S1Q92572 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
AP3S1Q92572 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP3S1Q92572 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
AP3S1Q92572 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP3S1Q92572 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC17.18■□□□□ 0.34
AP3S1Q92572 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.18■□□□□ 0.34
AP3S1Q92572 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.18■□□□□ 0.34
AP3S1Q92572 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.18■□□□□ 0.34
AP3S1Q92572 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
AP3S1Q92572 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
AP3S1Q92572 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.18■□□□□ 0.34
AP3S1Q92572 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP3S1Q92572 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP3S1Q92572 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP3S1Q92572 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP3S1Q92572 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.18■□□□□ 0.34
AP3S1Q92572 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP3S1Q92572 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
AP3S1Q92572 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.17■□□□□ 0.34
AP3S1Q92572 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
AP3S1Q92572 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP3S1Q92572 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.17■□□□□ 0.34
AP3S1Q92572 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
AP3S1Q92572 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
AP3S1Q92572 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP3S1Q92572 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.17■□□□□ 0.34
AP3S1Q92572 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP3S1Q92572 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
AP3S1Q92572 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP3S1Q92572 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP3S1Q92572 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
AP3S1Q92572 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
AP3S1Q92572 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP3S1Q92572 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
AP3S1Q92572 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP3S1Q92572 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
AP3S1Q92572 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP3S1Q92572 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP3S1Q92572 AL031598.1-201ENST00000561511 1773 ntBASIC17.17■□□□□ 0.34
AP3S1Q92572 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
AP3S1Q92572 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP3S1Q92572 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
AP3S1Q92572 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
AP3S1Q92572 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.17■□□□□ 0.34
AP3S1Q92572 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP3S1Q92572 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP3S1Q92572 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
AP3S1Q92572 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP3S1Q92572 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.16■□□□□ 0.34
AP3S1Q92572 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP3S1Q92572 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP3S1Q92572 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP3S1Q92572 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
AP3S1Q92572 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP3S1Q92572 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.16■□□□□ 0.34
AP3S1Q92572 AL358852.1-201ENST00000623174 1268 ntBASIC17.16■□□□□ 0.34
AP3S1Q92572 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP3S1Q92572 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.16■□□□□ 0.34
AP3S1Q92572 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP3S1Q92572 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.16■□□□□ 0.34
AP3S1Q92572 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.16■□□□□ 0.34
AP3S1Q92572 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
AP3S1Q92572 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
AP3S1Q92572 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP3S1Q92572 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
AP3S1Q92572 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
AP3S1Q92572 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP3S1Q92572 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP3S1Q92572 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP3S1Q92572 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.16■□□□□ 0.34
AP3S1Q92572 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
AP3S1Q92572 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
AP3S1Q92572 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3S1Q92572 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
AP3S1Q92572 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms