Protein–RNA interactions for Protein: Q8WXC6

COPS9, COP9 signalosome complex subunit 9, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9Q8WXC6 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC13.19□□□□□ -0.3
COPS9Q8WXC6 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
COPS9Q8WXC6 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
COPS9Q8WXC6 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
COPS9Q8WXC6 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
COPS9Q8WXC6 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
COPS9Q8WXC6 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
COPS9Q8WXC6 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.18□□□□□ -0.3
COPS9Q8WXC6 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC13.18□□□□□ -0.3
COPS9Q8WXC6 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
COPS9Q8WXC6 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
COPS9Q8WXC6 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COPS9Q8WXC6 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COPS9Q8WXC6 AC090164.3-201ENST00000610780 2143 ntBASIC13.18□□□□□ -0.3
COPS9Q8WXC6 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
COPS9Q8WXC6 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COPS9Q8WXC6 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COPS9Q8WXC6 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
COPS9Q8WXC6 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COPS9Q8WXC6 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
COPS9Q8WXC6 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
COPS9Q8WXC6 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
COPS9Q8WXC6 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
COPS9Q8WXC6 SMUG1P1-201ENST00000590640 811 ntBASIC13.18□□□□□ -0.3
COPS9Q8WXC6 AL138724.1-201ENST00000606771 1088 ntBASIC13.18□□□□□ -0.3
COPS9Q8WXC6 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC13.18□□□□□ -0.3
COPS9Q8WXC6 MIR6724-1-201ENST00000616420 92 ntBASIC13.18□□□□□ -0.3
COPS9Q8WXC6 MIR6724-2-201ENST00000616483 92 ntBASIC13.18□□□□□ -0.3
COPS9Q8WXC6 MIR6724-4-201ENST00000617390 92 ntBASIC13.18□□□□□ -0.3
COPS9Q8WXC6 MIR6724-3-201ENST00000622482 92 ntBASIC13.18□□□□□ -0.3
COPS9Q8WXC6 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC13.18□□□□□ -0.3
COPS9Q8WXC6 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
COPS9Q8WXC6 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COPS9Q8WXC6 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
COPS9Q8WXC6 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COPS9Q8WXC6 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
COPS9Q8WXC6 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
COPS9Q8WXC6 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COPS9Q8WXC6 TP73-202ENST00000354437 2140 ntTSL 5 BASIC13.18□□□□□ -0.3
COPS9Q8WXC6 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC13.18□□□□□ -0.3
COPS9Q8WXC6 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
COPS9Q8WXC6 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
COPS9Q8WXC6 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
COPS9Q8WXC6 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COPS9Q8WXC6 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
COPS9Q8WXC6 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
COPS9Q8WXC6 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.17□□□□□ -0.3
COPS9Q8WXC6 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
COPS9Q8WXC6 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
COPS9Q8WXC6 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC13.17□□□□□ -0.3
COPS9Q8WXC6 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC13.17□□□□□ -0.3
COPS9Q8WXC6 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
COPS9Q8WXC6 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COPS9Q8WXC6 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
COPS9Q8WXC6 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
COPS9Q8WXC6 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COPS9Q8WXC6 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COPS9Q8WXC6 MIR600HG-201ENST00000449175 5984 ntBASIC13.17□□□□□ -0.3
COPS9Q8WXC6 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC13.17□□□□□ -0.3
COPS9Q8WXC6 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COPS9Q8WXC6 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COPS9Q8WXC6 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
COPS9Q8WXC6 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
COPS9Q8WXC6 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
COPS9Q8WXC6 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COPS9Q8WXC6 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC13.17□□□□□ -0.3
COPS9Q8WXC6 AC103834.1-201ENST00000520383 144 ntBASIC13.17□□□□□ -0.3
COPS9Q8WXC6 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC13.17□□□□□ -0.3
COPS9Q8WXC6 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC13.17□□□□□ -0.3
COPS9Q8WXC6 ABHD17AP5-201ENST00000580133 923 ntBASIC13.17□□□□□ -0.3
COPS9Q8WXC6 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC13.17□□□□□ -0.3
COPS9Q8WXC6 AC053503.5-201ENST00000601508 636 ntBASIC13.17□□□□□ -0.3
COPS9Q8WXC6 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COPS9Q8WXC6 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COPS9Q8WXC6 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
COPS9Q8WXC6 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC13.17□□□□□ -0.3
COPS9Q8WXC6 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
COPS9Q8WXC6 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
COPS9Q8WXC6 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COPS9Q8WXC6 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
COPS9Q8WXC6 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COPS9Q8WXC6 CROCCP3-202ENST00000420820 1947 ntBASIC13.17□□□□□ -0.3
COPS9Q8WXC6 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC13.17□□□□□ -0.3
COPS9Q8WXC6 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
COPS9Q8WXC6 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COPS9Q8WXC6 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
COPS9Q8WXC6 ASL-203ENST00000380839 1765 ntTSL 5 BASIC13.17□□□□□ -0.3
COPS9Q8WXC6 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC13.17□□□□□ -0.3
COPS9Q8WXC6 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COPS9Q8WXC6 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COPS9Q8WXC6 AC007613.1-201ENST00000572811 2597 ntBASIC13.17□□□□□ -0.3
COPS9Q8WXC6 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC13.17□□□□□ -0.3
COPS9Q8WXC6 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COPS9Q8WXC6 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.17□□□□□ -0.3
COPS9Q8WXC6 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COPS9Q8WXC6 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
COPS9Q8WXC6 MOK-225ENST00000522867 1883 ntTSL 5 BASIC13.16□□□□□ -0.3
COPS9Q8WXC6 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
COPS9Q8WXC6 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
COPS9Q8WXC6 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms