Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
RETREG2Q8NC44 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RETREG2Q8NC44 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC22.11■■□□□ 1.13
RETREG2Q8NC44 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC22.1■■□□□ 1.13
RETREG2Q8NC44 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC22.1■■□□□ 1.13
RETREG2Q8NC44 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RETREG2Q8NC44 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC22.1■■□□□ 1.13
RETREG2Q8NC44 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
RETREG2Q8NC44 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC22.1■■□□□ 1.13
RETREG2Q8NC44 NUDT16P1-203ENST00000513809 620 ntBASIC22.1■■□□□ 1.13
RETREG2Q8NC44 AL049597.2-201ENST00000565575 961 ntBASIC22.1■■□□□ 1.13
RETREG2Q8NC44 MIR6786-201ENST00000616843 113 ntBASIC22.1■■□□□ 1.13
RETREG2Q8NC44 AL590326.2-201ENST00000625139 305 ntBASIC22.1■■□□□ 1.13
RETREG2Q8NC44 AC092865.7-201ENST00000641832 219 ntBASIC22.1■■□□□ 1.13
RETREG2Q8NC44 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RETREG2Q8NC44 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC22.1■■□□□ 1.13
RETREG2Q8NC44 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC22.1■■□□□ 1.13
RETREG2Q8NC44 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC22.1■■□□□ 1.13
RETREG2Q8NC44 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RETREG2Q8NC44 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC22.09■■□□□ 1.13
RETREG2Q8NC44 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC22.09■■□□□ 1.13
RETREG2Q8NC44 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RETREG2Q8NC44 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
RETREG2Q8NC44 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC22.09■■□□□ 1.13
RETREG2Q8NC44 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC22.09■■□□□ 1.13
RETREG2Q8NC44 RBM17P1-201ENST00000453646 1190 ntBASIC22.09■■□□□ 1.13
RETREG2Q8NC44 KRT18P35-201ENST00000510488 1269 ntBASIC22.09■■□□□ 1.13
RETREG2Q8NC44 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC22.09■■□□□ 1.13
RETREG2Q8NC44 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC22.09■■□□□ 1.13
RETREG2Q8NC44 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC22.09■■□□□ 1.13
RETREG2Q8NC44 AC145285.6-201ENST00000604632 637 ntBASIC22.09■■□□□ 1.13
RETREG2Q8NC44 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC22.09■■□□□ 1.13
RETREG2Q8NC44 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC22.09■■□□□ 1.13
RETREG2Q8NC44 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
RETREG2Q8NC44 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC22.09■■□□□ 1.13
RETREG2Q8NC44 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RETREG2Q8NC44 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RETREG2Q8NC44 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC22.08■■□□□ 1.13
RETREG2Q8NC44 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC22.08■■□□□ 1.13
RETREG2Q8NC44 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RETREG2Q8NC44 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RETREG2Q8NC44 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RETREG2Q8NC44 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC22.08■■□□□ 1.13
RETREG2Q8NC44 GLDC-219ENST00000640208 420 ntTSL 2 BASIC22.08■■□□□ 1.13
RETREG2Q8NC44 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
RETREG2Q8NC44 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC22.08■■□□□ 1.12
RETREG2Q8NC44 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC22.08■■□□□ 1.12
RETREG2Q8NC44 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
RETREG2Q8NC44 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC22.08■■□□□ 1.12
RETREG2Q8NC44 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RETREG2Q8NC44 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC22.07■■□□□ 1.12
RETREG2Q8NC44 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC22.07■■□□□ 1.12
RETREG2Q8NC44 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RETREG2Q8NC44 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC22.07■■□□□ 1.12
RETREG2Q8NC44 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RETREG2Q8NC44 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
RETREG2Q8NC44 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RETREG2Q8NC44 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RETREG2Q8NC44 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC22.07■■□□□ 1.12
RETREG2Q8NC44 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC22.07■■□□□ 1.12
RETREG2Q8NC44 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC22.07■■□□□ 1.12
RETREG2Q8NC44 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RETREG2Q8NC44 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RETREG2Q8NC44 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
RETREG2Q8NC44 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
RETREG2Q8NC44 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RETREG2Q8NC44 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RETREG2Q8NC44 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RETREG2Q8NC44 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC22.07■■□□□ 1.12
RETREG2Q8NC44 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RETREG2Q8NC44 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RETREG2Q8NC44 SMG8-203ENST00000578922 2178 ntBASIC22.06■■□□□ 1.12
RETREG2Q8NC44 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC22.06■■□□□ 1.12
RETREG2Q8NC44 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RETREG2Q8NC44 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC22.06■■□□□ 1.12
RETREG2Q8NC44 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC22.06■■□□□ 1.12
RETREG2Q8NC44 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RETREG2Q8NC44 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RETREG2Q8NC44 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
RETREG2Q8NC44 CALM3-202ENST00000391918 702 ntTSL 2 BASIC22.06■■□□□ 1.12
RETREG2Q8NC44 MIR1238-201ENST00000408483 83 ntBASIC22.06■■□□□ 1.12
RETREG2Q8NC44 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC22.06■■□□□ 1.12
RETREG2Q8NC44 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC22.06■■□□□ 1.12
RETREG2Q8NC44 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
RETREG2Q8NC44 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC22.06■■□□□ 1.12
RETREG2Q8NC44 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC22.06■■□□□ 1.12
RETREG2Q8NC44 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC22.06■■□□□ 1.12
RETREG2Q8NC44 AP000525.1-201ENST00000608286 694 ntBASIC22.06■■□□□ 1.12
RETREG2Q8NC44 REXO1L10P-201ENST00000615707 1290 ntBASIC22.06■■□□□ 1.12
RETREG2Q8NC44 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC22.06■■□□□ 1.12
RETREG2Q8NC44 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
RETREG2Q8NC44 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RETREG2Q8NC44 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RETREG2Q8NC44 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RETREG2Q8NC44 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RETREG2Q8NC44 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC22.06■■□□□ 1.12
RETREG2Q8NC44 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RETREG2Q8NC44 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC22.06■■□□□ 1.12
RETREG2Q8NC44 KRT16P6-202ENST00000425692 1426 ntBASIC22.06■■□□□ 1.12
RETREG2Q8NC44 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms