Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.02■□□□□ 0.8
SLC44A3Q8N4M1 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.02■□□□□ 0.8
SLC44A3Q8N4M1 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC44A3Q8N4M1 CLEC4GP1-201ENST00000596555 870 ntBASIC20.02■□□□□ 0.8
SLC44A3Q8N4M1 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
SLC44A3Q8N4M1 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.02■□□□□ 0.8
SLC44A3Q8N4M1 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
SLC44A3Q8N4M1 AC008622.2-201ENST00000617006 1229 ntBASIC20.02■□□□□ 0.8
SLC44A3Q8N4M1 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLC44A3Q8N4M1 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.02■□□□□ 0.8
SLC44A3Q8N4M1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.02■□□□□ 0.79
SLC44A3Q8N4M1 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.02■□□□□ 0.79
SLC44A3Q8N4M1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.79
SLC44A3Q8N4M1 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
SLC44A3Q8N4M1 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
SLC44A3Q8N4M1 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SLC44A3Q8N4M1 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.02■□□□□ 0.79
SLC44A3Q8N4M1 KRT8P8-201ENST00000434750 1448 ntBASIC20.02■□□□□ 0.79
SLC44A3Q8N4M1 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SLC44A3Q8N4M1 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.01■□□□□ 0.79
SLC44A3Q8N4M1 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC44A3Q8N4M1 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC44A3Q8N4M1 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC44A3Q8N4M1 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.01■□□□□ 0.79
SLC44A3Q8N4M1 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.01■□□□□ 0.79
SLC44A3Q8N4M1 KRT18P38-201ENST00000449496 1282 ntBASIC20.01■□□□□ 0.79
SLC44A3Q8N4M1 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.01■□□□□ 0.79
SLC44A3Q8N4M1 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.01■□□□□ 0.79
SLC44A3Q8N4M1 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.01■□□□□ 0.79
SLC44A3Q8N4M1 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.01■□□□□ 0.79
SLC44A3Q8N4M1 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC44A3Q8N4M1 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC44A3Q8N4M1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC44A3Q8N4M1 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC44A3Q8N4M1 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SLC44A3Q8N4M1 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SLC44A3Q8N4M1 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20■□□□□ 0.79
SLC44A3Q8N4M1 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20■□□□□ 0.79
SLC44A3Q8N4M1 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SLC44A3Q8N4M1 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC44A3Q8N4M1 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20■□□□□ 0.79
SLC44A3Q8N4M1 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SLC44A3Q8N4M1 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC44A3Q8N4M1 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC44A3Q8N4M1 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SLC44A3Q8N4M1 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20■□□□□ 0.79
SLC44A3Q8N4M1 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20■□□□□ 0.79
SLC44A3Q8N4M1 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20■□□□□ 0.79
SLC44A3Q8N4M1 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20■□□□□ 0.79
SLC44A3Q8N4M1 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20■□□□□ 0.79
SLC44A3Q8N4M1 AC069148.1-201ENST00000608741 768 ntBASIC20■□□□□ 0.79
SLC44A3Q8N4M1 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20■□□□□ 0.79
SLC44A3Q8N4M1 BID-212ENST00000614949 1988 ntTSL 5 BASIC20■□□□□ 0.79
SLC44A3Q8N4M1 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC44A3Q8N4M1 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20■□□□□ 0.79
SLC44A3Q8N4M1 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
SLC44A3Q8N4M1 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SLC44A3Q8N4M1 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SLC44A3Q8N4M1 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC44A3Q8N4M1 AC092720.2-201ENST00000602388 1665 ntBASIC20■□□□□ 0.79
SLC44A3Q8N4M1 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC44A3Q8N4M1 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20■□□□□ 0.79
SLC44A3Q8N4M1 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC44A3Q8N4M1 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC44A3Q8N4M1 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC44A3Q8N4M1 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.99■□□□□ 0.79
SLC44A3Q8N4M1 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC44A3Q8N4M1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SLC44A3Q8N4M1 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SLC44A3Q8N4M1 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SLC44A3Q8N4M1 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SLC44A3Q8N4M1 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SLC44A3Q8N4M1 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SLC44A3Q8N4M1 AP003041.3-201ENST00000527151 707 ntBASIC19.99■□□□□ 0.79
SLC44A3Q8N4M1 AL136038.3-201ENST00000561909 1096 ntBASIC19.99■□□□□ 0.79
SLC44A3Q8N4M1 AL160286.2-201ENST00000567150 934 ntBASIC19.99■□□□□ 0.79
SLC44A3Q8N4M1 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.99■□□□□ 0.79
SLC44A3Q8N4M1 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.99■□□□□ 0.79
SLC44A3Q8N4M1 AC007225.1-201ENST00000566331 1836 ntBASIC19.99■□□□□ 0.79
SLC44A3Q8N4M1 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SLC44A3Q8N4M1 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.99■□□□□ 0.79
SLC44A3Q8N4M1 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SLC44A3Q8N4M1 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SLC44A3Q8N4M1 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
SLC44A3Q8N4M1 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SLC44A3Q8N4M1 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC44A3Q8N4M1 AC006128.1-201ENST00000624704 1661 ntBASIC19.98■□□□□ 0.79
SLC44A3Q8N4M1 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.98■□□□□ 0.79
SLC44A3Q8N4M1 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.98■□□□□ 0.79
SLC44A3Q8N4M1 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.98■□□□□ 0.79
SLC44A3Q8N4M1 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.98■□□□□ 0.79
SLC44A3Q8N4M1 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.98■□□□□ 0.79
SLC44A3Q8N4M1 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SLC44A3Q8N4M1 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.98■□□□□ 0.79
SLC44A3Q8N4M1 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC44A3Q8N4M1 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC44A3Q8N4M1 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC44A3Q8N4M1 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.98■□□□□ 0.79
SLC44A3Q8N4M1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SLC44A3Q8N4M1 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms