Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SCML4Q8N228 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SCML4Q8N228 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.33■□□□□ 0.85
SCML4Q8N228 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SCML4Q8N228 FAM197Y1-201ENST00000421178 764 ntBASIC20.33■□□□□ 0.85
SCML4Q8N228 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.33■□□□□ 0.85
SCML4Q8N228 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.33■□□□□ 0.85
SCML4Q8N228 AC116562.2-201ENST00000507042 360 ntBASIC20.33■□□□□ 0.85
SCML4Q8N228 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.33■□□□□ 0.85
SCML4Q8N228 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.33■□□□□ 0.85
SCML4Q8N228 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.33■□□□□ 0.85
SCML4Q8N228 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.33■□□□□ 0.85
SCML4Q8N228 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.33■□□□□ 0.85
SCML4Q8N228 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.33■□□□□ 0.85
SCML4Q8N228 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.33■□□□□ 0.85
SCML4Q8N228 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.33■□□□□ 0.85
SCML4Q8N228 AC131212.4-201ENST00000623606 975 ntBASIC20.33■□□□□ 0.85
SCML4Q8N228 CR392000.1-201ENST00000624770 1228 ntBASIC20.33■□□□□ 0.85
SCML4Q8N228 AL031985.4-201ENST00000642138 673 ntBASIC20.33■□□□□ 0.85
SCML4Q8N228 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SCML4Q8N228 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.33■□□□□ 0.84
SCML4Q8N228 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.33■□□□□ 0.84
SCML4Q8N228 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SCML4Q8N228 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SCML4Q8N228 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
SCML4Q8N228 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.33■□□□□ 0.84
SCML4Q8N228 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SCML4Q8N228 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SCML4Q8N228 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCML4Q8N228 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCML4Q8N228 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.32■□□□□ 0.84
SCML4Q8N228 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SCML4Q8N228 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCML4Q8N228 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
SCML4Q8N228 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCML4Q8N228 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
SCML4Q8N228 AL596275.1-201ENST00000423464 877 ntBASIC20.32■□□□□ 0.84
SCML4Q8N228 NUDT16P1-203ENST00000513809 620 ntBASIC20.32■□□□□ 0.84
SCML4Q8N228 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SCML4Q8N228 AL160286.2-201ENST00000567150 934 ntBASIC20.32■□□□□ 0.84
SCML4Q8N228 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.32■□□□□ 0.84
SCML4Q8N228 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
SCML4Q8N228 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SCML4Q8N228 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SCML4Q8N228 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCML4Q8N228 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SCML4Q8N228 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SCML4Q8N228 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCML4Q8N228 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCML4Q8N228 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCML4Q8N228 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCML4Q8N228 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCML4Q8N228 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SCML4Q8N228 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCML4Q8N228 ZNF815P-204ENST00000434898 1737 ntBASIC20.31■□□□□ 0.84
SCML4Q8N228 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCML4Q8N228 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCML4Q8N228 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCML4Q8N228 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.31■□□□□ 0.84
SCML4Q8N228 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.31■□□□□ 0.84
SCML4Q8N228 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SCML4Q8N228 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SCML4Q8N228 SNORA78-201ENST00000459373 127 ntBASIC20.31■□□□□ 0.84
SCML4Q8N228 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.31■□□□□ 0.84
SCML4Q8N228 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SCML4Q8N228 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.31■□□□□ 0.84
SCML4Q8N228 MIR4785-201ENST00000585005 73 ntBASIC20.31■□□□□ 0.84
SCML4Q8N228 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.31■□□□□ 0.84
SCML4Q8N228 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCML4Q8N228 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.31■□□□□ 0.84
SCML4Q8N228 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCML4Q8N228 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.31■□□□□ 0.84
SCML4Q8N228 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCML4Q8N228 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SCML4Q8N228 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCML4Q8N228 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.31■□□□□ 0.84
SCML4Q8N228 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.3■□□□□ 0.84
SCML4Q8N228 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.3■□□□□ 0.84
SCML4Q8N228 KRT17P2-201ENST00000300992 1314 ntBASIC20.3■□□□□ 0.84
SCML4Q8N228 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCML4Q8N228 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SCML4Q8N228 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCML4Q8N228 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCML4Q8N228 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SCML4Q8N228 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCML4Q8N228 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SCML4Q8N228 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.3■□□□□ 0.84
SCML4Q8N228 Z85996.1-201ENST00000494644 937 ntBASIC20.3■□□□□ 0.84
SCML4Q8N228 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.3■□□□□ 0.84
SCML4Q8N228 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.3■□□□□ 0.84
SCML4Q8N228 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.3■□□□□ 0.84
SCML4Q8N228 AC026471.5-201ENST00000615068 467 ntBASIC20.3■□□□□ 0.84
SCML4Q8N228 AC104417.2-201ENST00000562989 1793 ntBASIC20.3■□□□□ 0.84
SCML4Q8N228 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCML4Q8N228 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.3■□□□□ 0.84
SCML4Q8N228 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCML4Q8N228 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCML4Q8N228 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SCML4Q8N228 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.29■□□□□ 0.84
SCML4Q8N228 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms