Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 CALM3-202ENST00000391918 702 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC01561Q8N1V8 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
LINC01561Q8N1V8 AL512625.2-201ENST00000417533 625 ntBASIC13.08□□□□□ -0.32
LINC01561Q8N1V8 CNN2P6-201ENST00000439038 900 ntBASIC13.08□□□□□ -0.32
LINC01561Q8N1V8 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC01561Q8N1V8 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC01561Q8N1V8 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC01561Q8N1V8 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC01561Q8N1V8 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC01561Q8N1V8 WWOX-218ENST00000627394 894 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC01561Q8N1V8 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC01561Q8N1V8 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01561Q8N1V8 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01561Q8N1V8 LTB4R2-202ENST00000528054 3092 ntBASIC13.08□□□□□ -0.32
LINC01561Q8N1V8 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
LINC01561Q8N1V8 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01561Q8N1V8 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01561Q8N1V8 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
LINC01561Q8N1V8 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC01561Q8N1V8 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01561Q8N1V8 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC01561Q8N1V8 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
LINC01561Q8N1V8 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
LINC01561Q8N1V8 CROCCP3-202ENST00000420820 1947 ntBASIC13.07□□□□□ -0.32
LINC01561Q8N1V8 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
LINC01561Q8N1V8 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01561Q8N1V8 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01561Q8N1V8 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
LINC01561Q8N1V8 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01561Q8N1V8 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
LINC01561Q8N1V8 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01561Q8N1V8 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01561Q8N1V8 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01561Q8N1V8 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01561Q8N1V8 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01561Q8N1V8 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
LINC01561Q8N1V8 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
LINC01561Q8N1V8 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC13.07□□□□□ -0.32
LINC01561Q8N1V8 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC13.07□□□□□ -0.32
LINC01561Q8N1V8 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
LINC01561Q8N1V8 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01561Q8N1V8 DUX4L16-201ENST00000555130 1264 ntBASIC13.07□□□□□ -0.32
LINC01561Q8N1V8 AC137761.2-201ENST00000561729 223 ntBASIC13.07□□□□□ -0.32
LINC01561Q8N1V8 AC145350.3-201ENST00000569033 163 ntBASIC13.07□□□□□ -0.32
LINC01561Q8N1V8 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC13.07□□□□□ -0.32
LINC01561Q8N1V8 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01561Q8N1V8 AC231657.2-201ENST00000624556 255 ntBASIC13.07□□□□□ -0.32
LINC01561Q8N1V8 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01561Q8N1V8 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC13.07□□□□□ -0.32
LINC01561Q8N1V8 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01561Q8N1V8 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC01561Q8N1V8 AC093525.10-201ENST00000625130 1569 ntBASIC13.07□□□□□ -0.32
LINC01561Q8N1V8 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC13.07□□□□□ -0.32
LINC01561Q8N1V8 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01561Q8N1V8 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01561Q8N1V8 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
LINC01561Q8N1V8 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01561Q8N1V8 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01561Q8N1V8 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC13.06□□□□□ -0.32
LINC01561Q8N1V8 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC13.06□□□□□ -0.32
LINC01561Q8N1V8 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01561Q8N1V8 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01561Q8N1V8 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
LINC01561Q8N1V8 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
LINC01561Q8N1V8 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01561Q8N1V8 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01561Q8N1V8 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01561Q8N1V8 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
LINC01561Q8N1V8 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC13.06□□□□□ -0.32
LINC01561Q8N1V8 NME1-207ENST00000480143 964 ntTSL 2 BASIC13.06□□□□□ -0.32
LINC01561Q8N1V8 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC13.06□□□□□ -0.32
LINC01561Q8N1V8 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC13.06□□□□□ -0.32
LINC01561Q8N1V8 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01561Q8N1V8 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC13.06□□□□□ -0.32
LINC01561Q8N1V8 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC13.06□□□□□ -0.32
LINC01561Q8N1V8 PARP1-210ENST00000629232 477 ntTSL 5 BASIC13.06□□□□□ -0.32
LINC01561Q8N1V8 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC13.06□□□□□ -0.32
LINC01561Q8N1V8 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01561Q8N1V8 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01561Q8N1V8 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01561Q8N1V8 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01561Q8N1V8 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01561Q8N1V8 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01561Q8N1V8 TFP1-202ENST00000475455 1573 ntBASIC13.06□□□□□ -0.32
LINC01561Q8N1V8 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01561Q8N1V8 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC13.06□□□□□ -0.32
LINC01561Q8N1V8 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01561Q8N1V8 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01561Q8N1V8 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01561Q8N1V8 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01561Q8N1V8 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC13.06□□□□□ -0.32
LINC01561Q8N1V8 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01561Q8N1V8 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
LINC01561Q8N1V8 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC01561Q8N1V8 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC13.06□□□□□ -0.32
LINC01561Q8N1V8 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC01561Q8N1V8 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC13.05□□□□□ -0.32
LINC01561Q8N1V8 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
LINC01561Q8N1V8 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC13.05□□□□□ -0.32
LINC01561Q8N1V8 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms