Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
DDX60Q8IY21 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC24.15■■□□□ 1.46
DDX60Q8IY21 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC24.15■■□□□ 1.46
DDX60Q8IY21 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
DDX60Q8IY21 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
DDX60Q8IY21 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
DDX60Q8IY21 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
DDX60Q8IY21 ATP5G1P1-201ENST00000448724 379 ntBASIC24.15■■□□□ 1.46
DDX60Q8IY21 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC24.15■■□□□ 1.46
DDX60Q8IY21 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC24.15■■□□□ 1.46
DDX60Q8IY21 AC130371.2-201ENST00000619443 611 ntBASIC24.15■■□□□ 1.46
DDX60Q8IY21 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC24.14■■□□□ 1.46
DDX60Q8IY21 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC24.14■■□□□ 1.46
DDX60Q8IY21 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
DDX60Q8IY21 ARMC10P1-201ENST00000313754 855 ntBASIC24.14■■□□□ 1.45
DDX60Q8IY21 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
DDX60Q8IY21 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC24.14■■□□□ 1.45
DDX60Q8IY21 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC24.14■■□□□ 1.45
DDX60Q8IY21 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC24.14■■□□□ 1.45
DDX60Q8IY21 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
DDX60Q8IY21 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
DDX60Q8IY21 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC24.14■■□□□ 1.45
DDX60Q8IY21 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
DDX60Q8IY21 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
DDX60Q8IY21 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
DDX60Q8IY21 GOLGA2P11-201ENST00000562660 1621 ntBASIC24.14■■□□□ 1.45
DDX60Q8IY21 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC24.14■■□□□ 1.45
DDX60Q8IY21 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
DDX60Q8IY21 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
DDX60Q8IY21 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
DDX60Q8IY21 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
DDX60Q8IY21 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC24.13■■□□□ 1.45
DDX60Q8IY21 AL023803.3-201ENST00000615559 522 ntBASIC24.13■■□□□ 1.45
DDX60Q8IY21 AL590326.2-201ENST00000625139 305 ntBASIC24.13■■□□□ 1.45
DDX60Q8IY21 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
DDX60Q8IY21 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC24.13■■□□□ 1.45
DDX60Q8IY21 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC24.13■■□□□ 1.45
DDX60Q8IY21 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC24.13■■□□□ 1.45
DDX60Q8IY21 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
DDX60Q8IY21 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
DDX60Q8IY21 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
DDX60Q8IY21 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
DDX60Q8IY21 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
DDX60Q8IY21 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
DDX60Q8IY21 GUK1-204ENST00000366721 689 ntTSL 3 BASIC24.13■■□□□ 1.45
DDX60Q8IY21 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC24.13■■□□□ 1.45
DDX60Q8IY21 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
DDX60Q8IY21 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC24.13■■□□□ 1.45
DDX60Q8IY21 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
DDX60Q8IY21 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
DDX60Q8IY21 AP003041.3-201ENST00000527151 707 ntBASIC24.13■■□□□ 1.45
DDX60Q8IY21 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
DDX60Q8IY21 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
DDX60Q8IY21 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
DDX60Q8IY21 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC24.12■■□□□ 1.45
DDX60Q8IY21 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC24.12■■□□□ 1.45
DDX60Q8IY21 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC24.12■■□□□ 1.45
DDX60Q8IY21 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
DDX60Q8IY21 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
DDX60Q8IY21 FAM8A6P-201ENST00000407496 1135 ntBASIC24.12■■□□□ 1.45
DDX60Q8IY21 CA15P1-201ENST00000481698 905 ntBASIC24.12■■□□□ 1.45
DDX60Q8IY21 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC24.12■■□□□ 1.45
DDX60Q8IY21 AC083849.1-201ENST00000615227 514 ntBASIC24.12■■□□□ 1.45
DDX60Q8IY21 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
DDX60Q8IY21 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
DDX60Q8IY21 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC24.11■■□□□ 1.45
DDX60Q8IY21 AC009237.14-201ENST00000609975 1594 ntBASIC24.11■■□□□ 1.45
DDX60Q8IY21 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC24.11■■□□□ 1.45
DDX60Q8IY21 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
DDX60Q8IY21 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
DDX60Q8IY21 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
DDX60Q8IY21 SLC25A1P2-201ENST00000430693 912 ntBASIC24.11■■□□□ 1.45
DDX60Q8IY21 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC24.11■■□□□ 1.45
DDX60Q8IY21 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC24.11■■□□□ 1.45
DDX60Q8IY21 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC24.11■■□□□ 1.45
DDX60Q8IY21 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC24.11■■□□□ 1.45
DDX60Q8IY21 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
DDX60Q8IY21 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC24.11■■□□□ 1.45
DDX60Q8IY21 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
DDX60Q8IY21 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
DDX60Q8IY21 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC24.11■■□□□ 1.45
DDX60Q8IY21 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
DDX60Q8IY21 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
DDX60Q8IY21 AC092338.2-201ENST00000568827 1415 ntBASIC24.11■■□□□ 1.45
DDX60Q8IY21 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC24.1■■□□□ 1.45
DDX60Q8IY21 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC24.1■■□□□ 1.45
DDX60Q8IY21 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
DDX60Q8IY21 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
DDX60Q8IY21 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
DDX60Q8IY21 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
DDX60Q8IY21 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
DDX60Q8IY21 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC24.1■■□□□ 1.45
DDX60Q8IY21 AL359075.1-203ENST00000462729 1002 ntBASIC24.1■■□□□ 1.45
DDX60Q8IY21 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC24.1■■□□□ 1.45
DDX60Q8IY21 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC24.1■■□□□ 1.45
DDX60Q8IY21 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC24.1■■□□□ 1.45
DDX60Q8IY21 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC24.1■■□□□ 1.45
DDX60Q8IY21 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
DDX60Q8IY21 AL157384.1-201ENST00000445995 2473 ntBASIC24.1■■□□□ 1.45
DDX60Q8IY21 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC24.1■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms