Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF546Q86UE3 AC106820.2-201ENST00000563775 3264 ntBASIC16.2■□□□□ 0.18
ZNF546Q86UE3 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF546Q86UE3 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC16.19■□□□□ 0.18
ZNF546Q86UE3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF546Q86UE3 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF546Q86UE3 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.19■□□□□ 0.18
ZNF546Q86UE3 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.19■□□□□ 0.18
ZNF546Q86UE3 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ZNF546Q86UE3 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF546Q86UE3 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.19■□□□□ 0.18
ZNF546Q86UE3 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF546Q86UE3 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF546Q86UE3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
ZNF546Q86UE3 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF546Q86UE3 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
ZNF546Q86UE3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF546Q86UE3 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF546Q86UE3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF546Q86UE3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF546Q86UE3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF546Q86UE3 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF546Q86UE3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF546Q86UE3 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
ZNF546Q86UE3 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
ZNF546Q86UE3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC16.19■□□□□ 0.18
ZNF546Q86UE3 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF546Q86UE3 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
ZNF546Q86UE3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF546Q86UE3 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF546Q86UE3 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF546Q86UE3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF546Q86UE3 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF546Q86UE3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF546Q86UE3 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF546Q86UE3 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.19■□□□□ 0.18
ZNF546Q86UE3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF546Q86UE3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.19■□□□□ 0.18
ZNF546Q86UE3 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
ZNF546Q86UE3 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
ZNF546Q86UE3 KRT8P36-201ENST00000489121 1440 ntBASIC16.19■□□□□ 0.18
ZNF546Q86UE3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC16.19■□□□□ 0.18
ZNF546Q86UE3 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.19■□□□□ 0.18
ZNF546Q86UE3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF546Q86UE3 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.18■□□□□ 0.18
ZNF546Q86UE3 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF546Q86UE3 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.18■□□□□ 0.18
ZNF546Q86UE3 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.18■□□□□ 0.18
ZNF546Q86UE3 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF546Q86UE3 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
ZNF546Q86UE3 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF546Q86UE3 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF546Q86UE3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.18■□□□□ 0.18
ZNF546Q86UE3 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF546Q86UE3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF546Q86UE3 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
ZNF546Q86UE3 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF546Q86UE3 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
ZNF546Q86UE3 AC133561.4-201ENST00000566112 224 ntBASIC16.18■□□□□ 0.18
ZNF546Q86UE3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC16.18■□□□□ 0.18
ZNF546Q86UE3 TRIR-205ENST00000592273 783 ntTSL 3 BASIC16.18■□□□□ 0.18
ZNF546Q86UE3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC16.18■□□□□ 0.18
ZNF546Q86UE3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
ZNF546Q86UE3 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC16.18■□□□□ 0.18
ZNF546Q86UE3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF546Q86UE3 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF546Q86UE3 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF546Q86UE3 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF546Q86UE3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF546Q86UE3 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF546Q86UE3 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF546Q86UE3 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF546Q86UE3 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF546Q86UE3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF546Q86UE3 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
ZNF546Q86UE3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF546Q86UE3 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
ZNF546Q86UE3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF546Q86UE3 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.17■□□□□ 0.18
ZNF546Q86UE3 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF546Q86UE3 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF546Q86UE3 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF546Q86UE3 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
ZNF546Q86UE3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF546Q86UE3 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.17■□□□□ 0.18
ZNF546Q86UE3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC16.17■□□□□ 0.18
ZNF546Q86UE3 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC16.17■□□□□ 0.18
ZNF546Q86UE3 MIR4466-201ENST00000606121 54 ntBASIC16.17■□□□□ 0.18
ZNF546Q86UE3 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF546Q86UE3 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
ZNF546Q86UE3 AC116050.2-201ENST00000612102 1779 ntBASIC16.17■□□□□ 0.18
ZNF546Q86UE3 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF546Q86UE3 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
ZNF546Q86UE3 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
ZNF546Q86UE3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.17■□□□□ 0.18
ZNF546Q86UE3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF546Q86UE3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
ZNF546Q86UE3 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.17■□□□□ 0.18
ZNF546Q86UE3 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF546Q86UE3 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms