Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 ECEL1P1-201ENST00000373592 1742 ntBASIC16.51■□□□□ 0.23
CSMD2Q7Z408 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CSMD2Q7Z408 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CSMD2Q7Z408 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CSMD2Q7Z408 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CSMD2Q7Z408 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CSMD2Q7Z408 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CSMD2Q7Z408 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
CSMD2Q7Z408 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC16.5■□□□□ 0.23
CSMD2Q7Z408 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC16.5■□□□□ 0.23
CSMD2Q7Z408 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSMD2Q7Z408 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CSMD2Q7Z408 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSMD2Q7Z408 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSMD2Q7Z408 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CSMD2Q7Z408 HLA-A-209ENST00000638375 975 ntBASIC16.5■□□□□ 0.23
CSMD2Q7Z408 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CSMD2Q7Z408 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.5■□□□□ 0.23
CSMD2Q7Z408 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CSMD2Q7Z408 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CSMD2Q7Z408 STARP1-201ENST00000397973 869 ntBASIC16.5■□□□□ 0.23
CSMD2Q7Z408 KRT18P13-201ENST00000400056 1290 ntBASIC16.5■□□□□ 0.23
CSMD2Q7Z408 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.5■□□□□ 0.23
CSMD2Q7Z408 AC018553.1-201ENST00000616682 1458 ntBASIC16.5■□□□□ 0.23
CSMD2Q7Z408 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CSMD2Q7Z408 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
CSMD2Q7Z408 FBXW4P1-201ENST00000426721 2239 ntBASIC16.5■□□□□ 0.23
CSMD2Q7Z408 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CSMD2Q7Z408 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.5■□□□□ 0.23
CSMD2Q7Z408 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.5■□□□□ 0.23
CSMD2Q7Z408 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.5■□□□□ 0.23
CSMD2Q7Z408 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.5■□□□□ 0.23
CSMD2Q7Z408 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CSMD2Q7Z408 HLA-A-201ENST00000376802 1334 ntBASIC16.5■□□□□ 0.23
CSMD2Q7Z408 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSMD2Q7Z408 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.49■□□□□ 0.23
CSMD2Q7Z408 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSMD2Q7Z408 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CSMD2Q7Z408 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CSMD2Q7Z408 AC233723.2-201ENST00000623798 2106 ntBASIC16.49■□□□□ 0.23
CSMD2Q7Z408 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSMD2Q7Z408 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.49■□□□□ 0.23
CSMD2Q7Z408 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSMD2Q7Z408 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
CSMD2Q7Z408 PMS2P1-201ENST00000431037 1228 ntBASIC16.49■□□□□ 0.23
CSMD2Q7Z408 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CSMD2Q7Z408 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSMD2Q7Z408 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.49■□□□□ 0.23
CSMD2Q7Z408 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CSMD2Q7Z408 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
CSMD2Q7Z408 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSMD2Q7Z408 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CSMD2Q7Z408 FAAHP1-202ENST00000446499 1238 ntBASIC16.49■□□□□ 0.23
CSMD2Q7Z408 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.49■□□□□ 0.23
CSMD2Q7Z408 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSMD2Q7Z408 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSMD2Q7Z408 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CSMD2Q7Z408 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSMD2Q7Z408 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CSMD2Q7Z408 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CSMD2Q7Z408 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CSMD2Q7Z408 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CSMD2Q7Z408 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSMD2Q7Z408 AC004870.1-201ENST00000315132 882 ntBASIC16.48■□□□□ 0.23
CSMD2Q7Z408 HBZP1-201ENST00000354915 429 ntBASIC16.48■□□□□ 0.23
CSMD2Q7Z408 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CSMD2Q7Z408 AC079781.3-201ENST00000449110 356 ntBASIC16.48■□□□□ 0.23
CSMD2Q7Z408 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.48■□□□□ 0.23
CSMD2Q7Z408 AP002414.4-201ENST00000589764 1148 ntBASIC16.48■□□□□ 0.23
CSMD2Q7Z408 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.48■□□□□ 0.23
CSMD2Q7Z408 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.48■□□□□ 0.23
CSMD2Q7Z408 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CSMD2Q7Z408 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSMD2Q7Z408 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.48■□□□□ 0.23
CSMD2Q7Z408 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CSMD2Q7Z408 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.48■□□□□ 0.23
CSMD2Q7Z408 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSMD2Q7Z408 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.48■□□□□ 0.23
CSMD2Q7Z408 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSMD2Q7Z408 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC16.48■□□□□ 0.23
CSMD2Q7Z408 GUSBP5-202ENST00000510805 1989 ntBASIC16.48■□□□□ 0.23
CSMD2Q7Z408 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CSMD2Q7Z408 BX119927.1-201ENST00000636596 1552 ntBASIC16.48■□□□□ 0.23
CSMD2Q7Z408 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CSMD2Q7Z408 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CSMD2Q7Z408 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CSMD2Q7Z408 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSMD2Q7Z408 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSMD2Q7Z408 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.47■□□□□ 0.23
CSMD2Q7Z408 AC011498.5-201ENST00000592027 486 ntBASIC16.47■□□□□ 0.23
CSMD2Q7Z408 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CSMD2Q7Z408 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CSMD2Q7Z408 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
CSMD2Q7Z408 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSMD2Q7Z408 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CSMD2Q7Z408 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CSMD2Q7Z408 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CSMD2Q7Z408 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CSMD2Q7Z408 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.47■□□□□ 0.23
CSMD2Q7Z408 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms