Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.36■□□□□ 0.69
ZNF549Q6P9A3 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
ZNF549Q6P9A3 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF549Q6P9A3 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF549Q6P9A3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZNF549Q6P9A3 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
ZNF549Q6P9A3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.35■□□□□ 0.69
ZNF549Q6P9A3 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF549Q6P9A3 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
ZNF549Q6P9A3 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF549Q6P9A3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF549Q6P9A3 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.35■□□□□ 0.69
ZNF549Q6P9A3 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF549Q6P9A3 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
ZNF549Q6P9A3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF549Q6P9A3 AC087289.5-201ENST00000586076 3175 ntBASIC19.35■□□□□ 0.69
ZNF549Q6P9A3 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF549Q6P9A3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF549Q6P9A3 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
ZNF549Q6P9A3 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF549Q6P9A3 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF549Q6P9A3 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF549Q6P9A3 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.35■□□□□ 0.69
ZNF549Q6P9A3 UNC93B5-201ENST00000530315 699 ntBASIC19.35■□□□□ 0.69
ZNF549Q6P9A3 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.35■□□□□ 0.69
ZNF549Q6P9A3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF549Q6P9A3 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.35■□□□□ 0.69
ZNF549Q6P9A3 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
ZNF549Q6P9A3 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF549Q6P9A3 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF549Q6P9A3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
ZNF549Q6P9A3 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
ZNF549Q6P9A3 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.35■□□□□ 0.69
ZNF549Q6P9A3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
ZNF549Q6P9A3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF549Q6P9A3 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.35■□□□□ 0.69
ZNF549Q6P9A3 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF549Q6P9A3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF549Q6P9A3 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF549Q6P9A3 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF549Q6P9A3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF549Q6P9A3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF549Q6P9A3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.34■□□□□ 0.69
ZNF549Q6P9A3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF549Q6P9A3 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF549Q6P9A3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF549Q6P9A3 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.34■□□□□ 0.69
ZNF549Q6P9A3 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.34■□□□□ 0.69
ZNF549Q6P9A3 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.34■□□□□ 0.69
ZNF549Q6P9A3 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.34■□□□□ 0.69
ZNF549Q6P9A3 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.34■□□□□ 0.69
ZNF549Q6P9A3 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.34■□□□□ 0.69
ZNF549Q6P9A3 AC008403.3-201ENST00000598924 454 ntBASIC19.34■□□□□ 0.69
ZNF549Q6P9A3 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
ZNF549Q6P9A3 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.34■□□□□ 0.69
ZNF549Q6P9A3 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.34■□□□□ 0.69
ZNF549Q6P9A3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF549Q6P9A3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
ZNF549Q6P9A3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF549Q6P9A3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF549Q6P9A3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF549Q6P9A3 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF549Q6P9A3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF549Q6P9A3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.34■□□□□ 0.69
ZNF549Q6P9A3 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
ZNF549Q6P9A3 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF549Q6P9A3 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF549Q6P9A3 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.34■□□□□ 0.69
ZNF549Q6P9A3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF549Q6P9A3 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF549Q6P9A3 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF549Q6P9A3 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF549Q6P9A3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF549Q6P9A3 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
ZNF549Q6P9A3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF549Q6P9A3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF549Q6P9A3 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.33■□□□□ 0.69
ZNF549Q6P9A3 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
ZNF549Q6P9A3 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
ZNF549Q6P9A3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF549Q6P9A3 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF549Q6P9A3 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
ZNF549Q6P9A3 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.33■□□□□ 0.68
ZNF549Q6P9A3 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.33■□□□□ 0.68
ZNF549Q6P9A3 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF549Q6P9A3 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF549Q6P9A3 AL121829.2-201ENST00000620908 328 ntBASIC19.33■□□□□ 0.68
ZNF549Q6P9A3 AP006587.1-201ENST00000534129 1502 ntBASIC19.33■□□□□ 0.68
ZNF549Q6P9A3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.33■□□□□ 0.68
ZNF549Q6P9A3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF549Q6P9A3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
ZNF549Q6P9A3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.33■□□□□ 0.68
ZNF549Q6P9A3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF549Q6P9A3 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF549Q6P9A3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF549Q6P9A3 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF549Q6P9A3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF549Q6P9A3 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.32■□□□□ 0.68
ZNF549Q6P9A3 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.32■□□□□ 0.68
ZNF549Q6P9A3 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms