Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC079598.2-202ENST00000546624 1451 ntBASIC16.77■□□□□ 0.28
UBA52P62987 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
UBA52P62987 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
UBA52P62987 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
UBA52P62987 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.77■□□□□ 0.27
UBA52P62987 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.77■□□□□ 0.27
UBA52P62987 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
UBA52P62987 AC020763.4-201ENST00000623414 4170 ntBASIC16.77■□□□□ 0.27
UBA52P62987 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC16.77■□□□□ 0.27
UBA52P62987 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.77■□□□□ 0.27
UBA52P62987 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
UBA52P62987 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBA52P62987 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBA52P62987 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
UBA52P62987 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBA52P62987 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
UBA52P62987 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBA52P62987 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
UBA52P62987 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
UBA52P62987 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
UBA52P62987 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBA52P62987 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.76■□□□□ 0.27
UBA52P62987 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBA52P62987 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
UBA52P62987 LSM12P1-201ENST00000411836 588 ntBASIC16.76■□□□□ 0.27
UBA52P62987 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBA52P62987 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UBA52P62987 AC026366.1-201ENST00000488803 879 ntBASIC16.76■□□□□ 0.27
UBA52P62987 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.76■□□□□ 0.27
UBA52P62987 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.76■□□□□ 0.27
UBA52P62987 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.76■□□□□ 0.27
UBA52P62987 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.76■□□□□ 0.27
UBA52P62987 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.76■□□□□ 0.27
UBA52P62987 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.76■□□□□ 0.27
UBA52P62987 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.76■□□□□ 0.27
UBA52P62987 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.76■□□□□ 0.27
UBA52P62987 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.76■□□□□ 0.27
UBA52P62987 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBA52P62987 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
UBA52P62987 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UBA52P62987 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBA52P62987 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.76■□□□□ 0.27
UBA52P62987 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBA52P62987 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.75■□□□□ 0.27
UBA52P62987 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBA52P62987 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBA52P62987 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC16.75■□□□□ 0.27
UBA52P62987 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBA52P62987 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBA52P62987 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
UBA52P62987 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBA52P62987 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
UBA52P62987 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBA52P62987 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBA52P62987 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.75■□□□□ 0.27
UBA52P62987 AL049812.1-201ENST00000432563 2267 ntBASIC16.75■□□□□ 0.27
UBA52P62987 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.75■□□□□ 0.27
UBA52P62987 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC16.75■□□□□ 0.27
UBA52P62987 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
UBA52P62987 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBA52P62987 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBA52P62987 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
UBA52P62987 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.75■□□□□ 0.27
UBA52P62987 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBA52P62987 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.75■□□□□ 0.27
UBA52P62987 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBA52P62987 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBA52P62987 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.75■□□□□ 0.27
UBA52P62987 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
UBA52P62987 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
UBA52P62987 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBA52P62987 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.75■□□□□ 0.27
UBA52P62987 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.75■□□□□ 0.27
UBA52P62987 UNC93B5-201ENST00000530315 699 ntBASIC16.75■□□□□ 0.27
UBA52P62987 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.75■□□□□ 0.27
UBA52P62987 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBA52P62987 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.75■□□□□ 0.27
UBA52P62987 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.75■□□□□ 0.27
UBA52P62987 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBA52P62987 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.75■□□□□ 0.27
UBA52P62987 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBA52P62987 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBA52P62987 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBA52P62987 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.75■□□□□ 0.27
UBA52P62987 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBA52P62987 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBA52P62987 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC16.74■□□□□ 0.27
UBA52P62987 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UBA52P62987 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC16.74■□□□□ 0.27
UBA52P62987 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UBA52P62987 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBA52P62987 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBA52P62987 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.74■□□□□ 0.27
UBA52P62987 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.74■□□□□ 0.27
UBA52P62987 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBA52P62987 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
UBA52P62987 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
UBA52P62987 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBA52P62987 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBA52P62987 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms