Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC13.87□□□□□ -0.19
UBE2D3P61077 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBE2D3P61077 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2D3P61077 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2D3P61077 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
UBE2D3P61077 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC13.86□□□□□ -0.19
UBE2D3P61077 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC13.86□□□□□ -0.19
UBE2D3P61077 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC13.86□□□□□ -0.19
UBE2D3P61077 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2D3P61077 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2D3P61077 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC13.86□□□□□ -0.19
UBE2D3P61077 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2D3P61077 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2D3P61077 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2D3P61077 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC13.86□□□□□ -0.19
UBE2D3P61077 LSM12P1-201ENST00000411836 588 ntBASIC13.86□□□□□ -0.19
UBE2D3P61077 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC13.86□□□□□ -0.19
UBE2D3P61077 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC13.86□□□□□ -0.19
UBE2D3P61077 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC13.86□□□□□ -0.19
UBE2D3P61077 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC13.86□□□□□ -0.19
UBE2D3P61077 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC13.86□□□□□ -0.19
UBE2D3P61077 AC022517.1-201ENST00000592429 346 ntBASIC13.86□□□□□ -0.19
UBE2D3P61077 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2D3P61077 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2D3P61077 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2D3P61077 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2D3P61077 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
UBE2D3P61077 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
UBE2D3P61077 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
UBE2D3P61077 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2D3P61077 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBE2D3P61077 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC13.85□□□□□ -0.19
UBE2D3P61077 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBE2D3P61077 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
UBE2D3P61077 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC13.85□□□□□ -0.19
UBE2D3P61077 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBE2D3P61077 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
UBE2D3P61077 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBE2D3P61077 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBE2D3P61077 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBE2D3P61077 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC13.85□□□□□ -0.19
UBE2D3P61077 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
UBE2D3P61077 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
UBE2D3P61077 AC133552.2-202ENST00000575694 574 ntBASIC13.85□□□□□ -0.19
UBE2D3P61077 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
UBE2D3P61077 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC13.85□□□□□ -0.19
UBE2D3P61077 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBE2D3P61077 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBE2D3P61077 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
UBE2D3P61077 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBE2D3P61077 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC13.85□□□□□ -0.19
UBE2D3P61077 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC13.85□□□□□ -0.19
UBE2D3P61077 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBE2D3P61077 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBE2D3P61077 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBE2D3P61077 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC13.85□□□□□ -0.19
UBE2D3P61077 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC13.85□□□□□ -0.19
UBE2D3P61077 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
UBE2D3P61077 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
UBE2D3P61077 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
UBE2D3P61077 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBE2D3P61077 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UBE2D3P61077 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBE2D3P61077 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
UBE2D3P61077 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBE2D3P61077 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBE2D3P61077 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBE2D3P61077 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBE2D3P61077 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC13.84□□□□□ -0.19
UBE2D3P61077 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC13.84□□□□□ -0.19
UBE2D3P61077 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UBE2D3P61077 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
UBE2D3P61077 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
UBE2D3P61077 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC13.84□□□□□ -0.19
UBE2D3P61077 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBE2D3P61077 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBE2D3P61077 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC13.84□□□□□ -0.19
UBE2D3P61077 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC13.84□□□□□ -0.19
UBE2D3P61077 AC004911.1-201ENST00000416316 871 ntBASIC13.84□□□□□ -0.19
UBE2D3P61077 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBE2D3P61077 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC13.84□□□□□ -0.19
UBE2D3P61077 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC13.84□□□□□ -0.19
UBE2D3P61077 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UBE2D3P61077 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
UBE2D3P61077 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBE2D3P61077 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC13.84□□□□□ -0.19
UBE2D3P61077 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBE2D3P61077 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC13.84□□□□□ -0.19
UBE2D3P61077 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
UBE2D3P61077 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC13.84□□□□□ -0.19
UBE2D3P61077 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBE2D3P61077 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC13.84□□□□□ -0.19
UBE2D3P61077 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBE2D3P61077 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBE2D3P61077 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBE2D3P61077 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBE2D3P61077 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
UBE2D3P61077 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
UBE2D3P61077 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
UBE2D3P61077 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms