Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CXCR4P61073 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
CXCR4P61073 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CXCR4P61073 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CXCR4P61073 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CXCR4P61073 AC018470.1-201ENST00000624790 3129 ntBASIC17.76■□□□□ 0.43
CXCR4P61073 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.76■□□□□ 0.43
CXCR4P61073 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CXCR4P61073 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CXCR4P61073 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.76■□□□□ 0.43
CXCR4P61073 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CXCR4P61073 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CXCR4P61073 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CXCR4P61073 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CXCR4P61073 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CXCR4P61073 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CXCR4P61073 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
CXCR4P61073 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CXCR4P61073 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CXCR4P61073 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CXCR4P61073 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.76■□□□□ 0.43
CXCR4P61073 KRT19P1-201ENST00000405746 1186 ntBASIC17.76■□□□□ 0.43
CXCR4P61073 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.76■□□□□ 0.43
CXCR4P61073 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.76■□□□□ 0.43
CXCR4P61073 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
CXCR4P61073 AL031963.3-201ENST00000606441 850 ntBASIC17.76■□□□□ 0.43
CXCR4P61073 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.76■□□□□ 0.43
CXCR4P61073 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.76■□□□□ 0.43
CXCR4P61073 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CXCR4P61073 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.76■□□□□ 0.43
CXCR4P61073 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CXCR4P61073 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.76■□□□□ 0.43
CXCR4P61073 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CXCR4P61073 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CXCR4P61073 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CXCR4P61073 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CXCR4P61073 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CXCR4P61073 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.75■□□□□ 0.43
CXCR4P61073 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CXCR4P61073 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CXCR4P61073 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CXCR4P61073 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.75■□□□□ 0.43
CXCR4P61073 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CXCR4P61073 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CXCR4P61073 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CXCR4P61073 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.75■□□□□ 0.43
CXCR4P61073 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CXCR4P61073 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CXCR4P61073 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.75■□□□□ 0.43
CXCR4P61073 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.75■□□□□ 0.43
CXCR4P61073 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CXCR4P61073 LTB4R2-202ENST00000528054 3092 ntBASIC17.75■□□□□ 0.43
CXCR4P61073 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CXCR4P61073 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CXCR4P61073 MIR638-201ENST00000385237 100 ntBASIC17.75■□□□□ 0.43
CXCR4P61073 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CXCR4P61073 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.75■□□□□ 0.43
CXCR4P61073 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
CXCR4P61073 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.75■□□□□ 0.43
CXCR4P61073 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.75■□□□□ 0.43
CXCR4P61073 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.75■□□□□ 0.43
CXCR4P61073 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.75■□□□□ 0.43
CXCR4P61073 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.75■□□□□ 0.43
CXCR4P61073 UBE2DNL-204ENST00000602536 740 ntBASIC17.75■□□□□ 0.43
CXCR4P61073 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CXCR4P61073 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
CXCR4P61073 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CXCR4P61073 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CXCR4P61073 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.75■□□□□ 0.43
CXCR4P61073 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
CXCR4P61073 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.75■□□□□ 0.43
CXCR4P61073 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CXCR4P61073 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CXCR4P61073 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CXCR4P61073 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CXCR4P61073 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CXCR4P61073 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CXCR4P61073 KRT8P20-201ENST00000423953 1409 ntBASIC17.74■□□□□ 0.43
CXCR4P61073 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CXCR4P61073 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CXCR4P61073 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CXCR4P61073 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CXCR4P61073 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.74■□□□□ 0.43
CXCR4P61073 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CXCR4P61073 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CXCR4P61073 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CXCR4P61073 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CXCR4P61073 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CXCR4P61073 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CXCR4P61073 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.74■□□□□ 0.43
CXCR4P61073 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CXCR4P61073 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CXCR4P61073 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.74■□□□□ 0.43
CXCR4P61073 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.74■□□□□ 0.43
CXCR4P61073 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.74■□□□□ 0.43
CXCR4P61073 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CXCR4P61073 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.74■□□□□ 0.43
CXCR4P61073 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CXCR4P61073 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CXCR4P61073 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms