Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ERVFC1P60507 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ERVFC1P60507 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.59■□□□□ 0.89
ERVFC1P60507 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ERVFC1P60507 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.59■□□□□ 0.89
ERVFC1P60507 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ERVFC1P60507 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ERVFC1P60507 KRT18P38-201ENST00000449496 1282 ntBASIC20.59■□□□□ 0.89
ERVFC1P60507 CA15P1-201ENST00000481698 905 ntBASIC20.59■□□□□ 0.89
ERVFC1P60507 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.59■□□□□ 0.89
ERVFC1P60507 AP003041.3-201ENST00000527151 707 ntBASIC20.59■□□□□ 0.89
ERVFC1P60507 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.59■□□□□ 0.89
ERVFC1P60507 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.59■□□□□ 0.89
ERVFC1P60507 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
ERVFC1P60507 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ERVFC1P60507 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
ERVFC1P60507 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ERVFC1P60507 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ERVFC1P60507 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ERVFC1P60507 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ERVFC1P60507 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ERVFC1P60507 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.58■□□□□ 0.89
ERVFC1P60507 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ERVFC1P60507 PRSS44-201ENST00000515154 1146 ntBASIC20.58■□□□□ 0.89
ERVFC1P60507 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.58■□□□□ 0.89
ERVFC1P60507 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.58■□□□□ 0.89
ERVFC1P60507 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.58■□□□□ 0.89
ERVFC1P60507 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.58■□□□□ 0.89
ERVFC1P60507 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.58■□□□□ 0.89
ERVFC1P60507 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.58■□□□□ 0.89
ERVFC1P60507 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ERVFC1P60507 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.58■□□□□ 0.88
ERVFC1P60507 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
ERVFC1P60507 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
ERVFC1P60507 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
ERVFC1P60507 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ERVFC1P60507 AC005332.1-201ENST00000577698 1310 ntBASIC20.57■□□□□ 0.88
ERVFC1P60507 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ERVFC1P60507 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.57■□□□□ 0.88
ERVFC1P60507 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ERVFC1P60507 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ERVFC1P60507 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ERVFC1P60507 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ERVFC1P60507 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ERVFC1P60507 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ERVFC1P60507 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
ERVFC1P60507 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.57■□□□□ 0.88
ERVFC1P60507 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ERVFC1P60507 DUSP5P1-201ENST00000441325 1139 ntBASIC20.57■□□□□ 0.88
ERVFC1P60507 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.57■□□□□ 0.88
ERVFC1P60507 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ERVFC1P60507 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.57■□□□□ 0.88
ERVFC1P60507 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.57■□□□□ 0.88
ERVFC1P60507 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ERVFC1P60507 CKBP1-201ENST00000565489 1086 ntBASIC20.57■□□□□ 0.88
ERVFC1P60507 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.57■□□□□ 0.88
ERVFC1P60507 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
ERVFC1P60507 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.57■□□□□ 0.88
ERVFC1P60507 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ERVFC1P60507 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ERVFC1P60507 KRT8P41-201ENST00000533985 1514 ntBASIC20.57■□□□□ 0.88
ERVFC1P60507 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ERVFC1P60507 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ERVFC1P60507 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ERVFC1P60507 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
ERVFC1P60507 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ERVFC1P60507 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ERVFC1P60507 KRT8P45-201ENST00000414328 1447 ntBASIC20.56■□□□□ 0.88
ERVFC1P60507 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.56■□□□□ 0.88
ERVFC1P60507 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ERVFC1P60507 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
ERVFC1P60507 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ERVFC1P60507 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.56■□□□□ 0.88
ERVFC1P60507 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ERVFC1P60507 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
ERVFC1P60507 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ERVFC1P60507 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ERVFC1P60507 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.56■□□□□ 0.88
ERVFC1P60507 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.56■□□□□ 0.88
ERVFC1P60507 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.56■□□□□ 0.88
ERVFC1P60507 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
ERVFC1P60507 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ERVFC1P60507 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ERVFC1P60507 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.56■□□□□ 0.88
ERVFC1P60507 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.56■□□□□ 0.88
ERVFC1P60507 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
ERVFC1P60507 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ERVFC1P60507 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ERVFC1P60507 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ERVFC1P60507 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ERVFC1P60507 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ERVFC1P60507 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.55■□□□□ 0.88
ERVFC1P60507 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ERVFC1P60507 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ERVFC1P60507 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.55■□□□□ 0.88
ERVFC1P60507 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ERVFC1P60507 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ERVFC1P60507 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ERVFC1P60507 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.55■□□□□ 0.88
ERVFC1P60507 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms