Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.68■□□□□ 0.58
VSX2P58304 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
VSX2P58304 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.68■□□□□ 0.58
VSX2P58304 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VSX2P58304 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
VSX2P58304 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.68■□□□□ 0.58
VSX2P58304 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VSX2P58304 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.68■□□□□ 0.58
VSX2P58304 SNORA78-201ENST00000459373 127 ntBASIC18.68■□□□□ 0.58
VSX2P58304 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.68■□□□□ 0.58
VSX2P58304 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VSX2P58304 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.68■□□□□ 0.58
VSX2P58304 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VSX2P58304 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VSX2P58304 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VSX2P58304 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VSX2P58304 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.68■□□□□ 0.58
VSX2P58304 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
VSX2P58304 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VSX2P58304 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
VSX2P58304 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VSX2P58304 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VSX2P58304 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.67■□□□□ 0.58
VSX2P58304 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.67■□□□□ 0.58
VSX2P58304 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VSX2P58304 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.67■□□□□ 0.58
VSX2P58304 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VSX2P58304 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.67■□□□□ 0.58
VSX2P58304 C1QL1P1-201ENST00000568105 661 ntBASIC18.67■□□□□ 0.58
VSX2P58304 AC113410.3-201ENST00000623366 203 ntBASIC18.67■□□□□ 0.58
VSX2P58304 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
VSX2P58304 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.67■□□□□ 0.58
VSX2P58304 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
VSX2P58304 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.67■□□□□ 0.58
VSX2P58304 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
VSX2P58304 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
VSX2P58304 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
VSX2P58304 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VSX2P58304 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.66■□□□□ 0.58
VSX2P58304 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VSX2P58304 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
VSX2P58304 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VSX2P58304 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.66■□□□□ 0.58
VSX2P58304 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.66■□□□□ 0.58
VSX2P58304 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.66■□□□□ 0.58
VSX2P58304 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VSX2P58304 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.66■□□□□ 0.58
VSX2P58304 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VSX2P58304 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.66■□□□□ 0.58
VSX2P58304 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VSX2P58304 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.66■□□□□ 0.58
VSX2P58304 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
VSX2P58304 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VSX2P58304 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VSX2P58304 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
VSX2P58304 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.65■□□□□ 0.58
VSX2P58304 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
VSX2P58304 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VSX2P58304 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
VSX2P58304 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
VSX2P58304 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
VSX2P58304 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.65■□□□□ 0.58
VSX2P58304 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VSX2P58304 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
VSX2P58304 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.65■□□□□ 0.58
VSX2P58304 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.65■□□□□ 0.58
VSX2P58304 TSPY7P-201ENST00000431358 1114 ntBASIC18.65■□□□□ 0.58
VSX2P58304 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
VSX2P58304 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VSX2P58304 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.65■□□□□ 0.58
VSX2P58304 MIR4497-201ENST00000583208 89 ntBASIC18.65■□□□□ 0.58
VSX2P58304 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VSX2P58304 AC073195.1-201ENST00000607241 877 ntBASIC18.65■□□□□ 0.58
VSX2P58304 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VSX2P58304 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VSX2P58304 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VSX2P58304 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.65■□□□□ 0.58
VSX2P58304 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
VSX2P58304 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VSX2P58304 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.65■□□□□ 0.58
VSX2P58304 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VSX2P58304 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.65■□□□□ 0.58
VSX2P58304 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VSX2P58304 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VSX2P58304 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.65■□□□□ 0.58
VSX2P58304 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
VSX2P58304 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.64■□□□□ 0.58
VSX2P58304 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
VSX2P58304 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
VSX2P58304 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
VSX2P58304 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
VSX2P58304 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
VSX2P58304 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.64■□□□□ 0.58
VSX2P58304 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VSX2P58304 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.64■□□□□ 0.57
VSX2P58304 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VSX2P58304 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VSX2P58304 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VSX2P58304 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VSX2P58304 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms