Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CLCN4P51793 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLCN4P51793 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLCN4P51793 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLCN4P51793 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLCN4P51793 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLCN4P51793 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CLCN4P51793 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLCN4P51793 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.55■□□□□ 0.88
CLCN4P51793 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.55■□□□□ 0.88
CLCN4P51793 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLCN4P51793 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.55■□□□□ 0.88
CLCN4P51793 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.55■□□□□ 0.88
CLCN4P51793 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.55■□□□□ 0.88
CLCN4P51793 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.55■□□□□ 0.88
CLCN4P51793 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.55■□□□□ 0.88
CLCN4P51793 YBX1P2-201ENST00000489612 999 ntBASIC20.55■□□□□ 0.88
CLCN4P51793 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.55■□□□□ 0.88
CLCN4P51793 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLCN4P51793 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.55■□□□□ 0.88
CLCN4P51793 AC091076.1-201ENST00000610741 619 ntBASIC20.55■□□□□ 0.88
CLCN4P51793 AL023803.3-201ENST00000615559 522 ntBASIC20.55■□□□□ 0.88
CLCN4P51793 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLCN4P51793 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLCN4P51793 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.55■□□□□ 0.88
CLCN4P51793 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.55■□□□□ 0.88
CLCN4P51793 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.55■□□□□ 0.88
CLCN4P51793 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.55■□□□□ 0.88
CLCN4P51793 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.55■□□□□ 0.88
CLCN4P51793 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLCN4P51793 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLCN4P51793 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLCN4P51793 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CLCN4P51793 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLCN4P51793 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLCN4P51793 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLCN4P51793 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CLCN4P51793 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLCN4P51793 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLCN4P51793 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.54■□□□□ 0.88
CLCN4P51793 BX119927.1-201ENST00000636596 1552 ntBASIC20.54■□□□□ 0.88
CLCN4P51793 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLCN4P51793 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.54■□□□□ 0.88
CLCN4P51793 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLCN4P51793 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLCN4P51793 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLCN4P51793 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLCN4P51793 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLCN4P51793 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.53■□□□□ 0.88
CLCN4P51793 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.53■□□□□ 0.88
CLCN4P51793 AL031133.1-201ENST00000406807 723 ntBASIC20.53■□□□□ 0.88
CLCN4P51793 TSPY5P-201ENST00000426936 936 ntBASIC20.53■□□□□ 0.88
CLCN4P51793 UPK3BP1-201ENST00000428678 509 ntBASIC20.53■□□□□ 0.88
CLCN4P51793 COX11P1-201ENST00000489116 835 ntBASIC20.53■□□□□ 0.88
CLCN4P51793 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.53■□□□□ 0.88
CLCN4P51793 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.53■□□□□ 0.88
CLCN4P51793 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.53■□□□□ 0.88
CLCN4P51793 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.53■□□□□ 0.88
CLCN4P51793 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.53■□□□□ 0.88
CLCN4P51793 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.53■□□□□ 0.88
CLCN4P51793 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLCN4P51793 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.53■□□□□ 0.88
CLCN4P51793 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLCN4P51793 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CLCN4P51793 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLCN4P51793 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLCN4P51793 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLCN4P51793 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
CLCN4P51793 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CLCN4P51793 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.52■□□□□ 0.88
CLCN4P51793 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.52■□□□□ 0.88
CLCN4P51793 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.52■□□□□ 0.88
CLCN4P51793 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLCN4P51793 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CLCN4P51793 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CLCN4P51793 AC141257.4-201ENST00000634557 245 ntBASIC20.52■□□□□ 0.88
CLCN4P51793 AC136944.6-201ENST00000634818 245 ntBASIC20.52■□□□□ 0.88
CLCN4P51793 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.52■□□□□ 0.88
CLCN4P51793 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CLCN4P51793 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
CLCN4P51793 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.52■□□□□ 0.87
CLCN4P51793 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLCN4P51793 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLCN4P51793 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLCN4P51793 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLCN4P51793 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CLCN4P51793 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLCN4P51793 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLCN4P51793 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLCN4P51793 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
CLCN4P51793 TSPY17P-201ENST00000450329 467 ntBASIC20.51■□□□□ 0.87
CLCN4P51793 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.51■□□□□ 0.87
CLCN4P51793 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.51■□□□□ 0.87
CLCN4P51793 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.51■□□□□ 0.87
CLCN4P51793 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.51■□□□□ 0.87
CLCN4P51793 AL353719.1-201ENST00000566847 864 ntBASIC20.51■□□□□ 0.87
CLCN4P51793 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLCN4P51793 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLCN4P51793 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLCN4P51793 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms