Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCKBRP32239 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CCKBRP32239 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCKBRP32239 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCKBRP32239 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCKBRP32239 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCKBRP32239 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.74■□□□□ 0.59
CCKBRP32239 ECEL1P2-202ENST00000465689 757 ntBASIC18.74■□□□□ 0.59
CCKBRP32239 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
CCKBRP32239 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.74■□□□□ 0.59
CCKBRP32239 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.74■□□□□ 0.59
CCKBRP32239 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CCKBRP32239 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
CCKBRP32239 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.74■□□□□ 0.59
CCKBRP32239 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCKBRP32239 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCKBRP32239 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CCKBRP32239 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCKBRP32239 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CCKBRP32239 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCKBRP32239 RCC2P6-201ENST00000526625 1557 ntBASIC18.73■□□□□ 0.59
CCKBRP32239 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.73■□□□□ 0.59
CCKBRP32239 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCKBRP32239 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCKBRP32239 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCKBRP32239 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCKBRP32239 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCKBRP32239 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCKBRP32239 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.73■□□□□ 0.59
CCKBRP32239 NTF6B-201ENST00000591913 560 ntBASIC18.73■□□□□ 0.59
CCKBRP32239 HLA-A-209ENST00000638375 975 ntBASIC18.73■□□□□ 0.59
CCKBRP32239 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCKBRP32239 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCKBRP32239 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CCKBRP32239 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCKBRP32239 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCKBRP32239 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CCKBRP32239 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCKBRP32239 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CCKBRP32239 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.72■□□□□ 0.59
CCKBRP32239 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.72■□□□□ 0.59
CCKBRP32239 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCKBRP32239 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCKBRP32239 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCKBRP32239 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.72■□□□□ 0.59
CCKBRP32239 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCKBRP32239 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCKBRP32239 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.72■□□□□ 0.59
CCKBRP32239 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.72■□□□□ 0.59
CCKBRP32239 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.72■□□□□ 0.59
CCKBRP32239 SLC25A1P4-201ENST00000567977 778 ntBASIC18.72■□□□□ 0.59
CCKBRP32239 AC011298.2-201ENST00000617989 482 ntBASIC18.72■□□□□ 0.59
CCKBRP32239 AC006011.2-201ENST00000621313 1158 ntBASIC18.72■□□□□ 0.59
CCKBRP32239 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCKBRP32239 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CCKBRP32239 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCKBRP32239 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCKBRP32239 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.72■□□□□ 0.59
CCKBRP32239 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CCKBRP32239 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCKBRP32239 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CCKBRP32239 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.71■□□□□ 0.59
CCKBRP32239 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.71■□□□□ 0.59
CCKBRP32239 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.71■□□□□ 0.59
CCKBRP32239 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCKBRP32239 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.71■□□□□ 0.59
CCKBRP32239 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CCKBRP32239 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCKBRP32239 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCKBRP32239 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CCKBRP32239 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
CCKBRP32239 AC004951.3-201ENST00000418645 1148 ntBASIC18.71■□□□□ 0.59
CCKBRP32239 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CCKBRP32239 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.71■□□□□ 0.59
CCKBRP32239 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.71■□□□□ 0.59
CCKBRP32239 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.71■□□□□ 0.59
CCKBRP32239 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCKBRP32239 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CCKBRP32239 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.71■□□□□ 0.59
CCKBRP32239 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.71■□□□□ 0.59
CCKBRP32239 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CCKBRP32239 FAM87A-204ENST00000613235 858 ntBASIC18.71■□□□□ 0.59
CCKBRP32239 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CCKBRP32239 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCKBRP32239 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CCKBRP32239 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCKBRP32239 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.71■□□□□ 0.59
CCKBRP32239 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.71■□□□□ 0.59
CCKBRP32239 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
CCKBRP32239 AC096733.2-201ENST00000609937 1394 ntBASIC18.7■□□□□ 0.58
CCKBRP32239 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCKBRP32239 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCKBRP32239 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.7■□□□□ 0.58
CCKBRP32239 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCKBRP32239 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCKBRP32239 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCKBRP32239 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.7■□□□□ 0.58
CCKBRP32239 BX664615.1-201ENST00000443558 458 ntBASIC18.7■□□□□ 0.58
CCKBRP32239 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCKBRP32239 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms