Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
EPHA3P29320 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
EPHA3P29320 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
EPHA3P29320 AL355472.2-201ENST00000422958 438 ntBASIC18.96■□□□□ 0.63
EPHA3P29320 CNN2P6-201ENST00000439038 900 ntBASIC18.96■□□□□ 0.63
EPHA3P29320 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
EPHA3P29320 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.96■□□□□ 0.63
EPHA3P29320 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.96■□□□□ 0.63
EPHA3P29320 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
EPHA3P29320 CYP2T3P-201ENST00000601990 817 ntBASIC18.96■□□□□ 0.63
EPHA3P29320 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.96■□□□□ 0.63
EPHA3P29320 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
EPHA3P29320 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
EPHA3P29320 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
EPHA3P29320 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.96■□□□□ 0.63
EPHA3P29320 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.96■□□□□ 0.63
EPHA3P29320 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
EPHA3P29320 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
EPHA3P29320 AC006333.2-201ENST00000607957 2099 ntBASIC18.96■□□□□ 0.63
EPHA3P29320 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
EPHA3P29320 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
EPHA3P29320 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EPHA3P29320 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EPHA3P29320 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.95■□□□□ 0.62
EPHA3P29320 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
EPHA3P29320 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EPHA3P29320 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EPHA3P29320 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EPHA3P29320 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
EPHA3P29320 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.95■□□□□ 0.62
EPHA3P29320 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.95■□□□□ 0.62
EPHA3P29320 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.95■□□□□ 0.62
EPHA3P29320 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.95■□□□□ 0.62
EPHA3P29320 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.95■□□□□ 0.62
EPHA3P29320 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
EPHA3P29320 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.95■□□□□ 0.62
EPHA3P29320 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
EPHA3P29320 KRT18P11-201ENST00000435214 1283 ntBASIC18.95■□□□□ 0.62
EPHA3P29320 AC023632.3-201ENST00000521633 145 ntBASIC18.95■□□□□ 0.62
EPHA3P29320 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
EPHA3P29320 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EPHA3P29320 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
EPHA3P29320 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.95■□□□□ 0.62
EPHA3P29320 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
EPHA3P29320 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.95■□□□□ 0.62
EPHA3P29320 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
EPHA3P29320 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EPHA3P29320 TEX21P-204ENST00000641479 1693 ntBASIC18.95■□□□□ 0.62
EPHA3P29320 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.95■□□□□ 0.62
EPHA3P29320 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EPHA3P29320 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.94■□□□□ 0.62
EPHA3P29320 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.94■□□□□ 0.62
EPHA3P29320 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.94■□□□□ 0.62
EPHA3P29320 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EPHA3P29320 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
EPHA3P29320 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.94■□□□□ 0.62
EPHA3P29320 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
EPHA3P29320 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EPHA3P29320 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
EPHA3P29320 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EPHA3P29320 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.94■□□□□ 0.62
EPHA3P29320 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.94■□□□□ 0.62
EPHA3P29320 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.94■□□□□ 0.62
EPHA3P29320 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.94■□□□□ 0.62
EPHA3P29320 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
EPHA3P29320 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EPHA3P29320 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
EPHA3P29320 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EPHA3P29320 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EPHA3P29320 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
EPHA3P29320 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EPHA3P29320 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.94■□□□□ 0.62
EPHA3P29320 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
EPHA3P29320 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EPHA3P29320 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
EPHA3P29320 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EPHA3P29320 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
EPHA3P29320 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHA3P29320 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHA3P29320 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHA3P29320 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
EPHA3P29320 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHA3P29320 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHA3P29320 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
EPHA3P29320 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
EPHA3P29320 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.93■□□□□ 0.62
EPHA3P29320 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.93■□□□□ 0.62
EPHA3P29320 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
EPHA3P29320 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
EPHA3P29320 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
EPHA3P29320 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHA3P29320 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHA3P29320 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.93■□□□□ 0.62
EPHA3P29320 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.93■□□□□ 0.62
EPHA3P29320 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.93■□□□□ 0.62
EPHA3P29320 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHA3P29320 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EPHA3P29320 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.93■□□□□ 0.62
EPHA3P29320 C2orf69P4-201ENST00000565394 541 ntBASIC18.93■□□□□ 0.62
EPHA3P29320 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms