Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
NCK1P16333 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
NCK1P16333 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
NCK1P16333 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NCK1P16333 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NCK1P16333 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.42■□□□□ 0.54
NCK1P16333 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NCK1P16333 AC018470.1-201ENST00000624790 3129 ntBASIC18.42■□□□□ 0.54
NCK1P16333 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
NCK1P16333 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NCK1P16333 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NCK1P16333 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NCK1P16333 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.41■□□□□ 0.54
NCK1P16333 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
NCK1P16333 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NCK1P16333 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NCK1P16333 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NCK1P16333 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.41■□□□□ 0.54
NCK1P16333 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NCK1P16333 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NCK1P16333 MCRIP2P1-201ENST00000394346 511 ntBASIC18.41■□□□□ 0.54
NCK1P16333 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NCK1P16333 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.41■□□□□ 0.54
NCK1P16333 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.41■□□□□ 0.54
NCK1P16333 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.41■□□□□ 0.54
NCK1P16333 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.41■□□□□ 0.54
NCK1P16333 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NCK1P16333 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NCK1P16333 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NCK1P16333 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
NCK1P16333 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
NCK1P16333 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
NCK1P16333 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NCK1P16333 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NCK1P16333 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
NCK1P16333 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.41■□□□□ 0.54
NCK1P16333 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
NCK1P16333 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCK1P16333 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCK1P16333 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCK1P16333 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCK1P16333 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCK1P16333 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NCK1P16333 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NCK1P16333 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCK1P16333 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.4■□□□□ 0.54
NCK1P16333 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCK1P16333 HLA-G-202ENST00000376815 851 ntBASIC18.4■□□□□ 0.54
NCK1P16333 HLA-G-203ENST00000376818 1127 ntBASIC18.4■□□□□ 0.54
NCK1P16333 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCK1P16333 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
NCK1P16333 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NCK1P16333 AC105020.6-201ENST00000621523 1217 ntBASIC18.4■□□□□ 0.54
NCK1P16333 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
NCK1P16333 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.4■□□□□ 0.54
NCK1P16333 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCK1P16333 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
NCK1P16333 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NCK1P16333 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCK1P16333 TEX21P-204ENST00000641479 1693 ntBASIC18.4■□□□□ 0.54
NCK1P16333 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCK1P16333 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCK1P16333 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCK1P16333 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCK1P16333 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCK1P16333 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NCK1P16333 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.4■□□□□ 0.54
NCK1P16333 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
NCK1P16333 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCK1P16333 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCK1P16333 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NCK1P16333 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.39■□□□□ 0.54
NCK1P16333 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
NCK1P16333 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
NCK1P16333 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCK1P16333 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
NCK1P16333 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCK1P16333 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCK1P16333 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NCK1P16333 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCK1P16333 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.39■□□□□ 0.53
NCK1P16333 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCK1P16333 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCK1P16333 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
NCK1P16333 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.39■□□□□ 0.53
NCK1P16333 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCK1P16333 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCK1P16333 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
NCK1P16333 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NCK1P16333 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCK1P16333 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NCK1P16333 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NCK1P16333 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCK1P16333 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
NCK1P16333 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.38■□□□□ 0.53
NCK1P16333 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCK1P16333 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NCK1P16333 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCK1P16333 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NCK1P16333 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms