Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.48■□□□□ 0.87
RARAP10276 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RARAP10276 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
RARAP10276 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RARAP10276 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
RARAP10276 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RARAP10276 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.47■□□□□ 0.87
RARAP10276 ID1-201ENST00000376105 1233 ntBASIC20.47■□□□□ 0.87
RARAP10276 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.47■□□□□ 0.87
RARAP10276 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.47■□□□□ 0.87
RARAP10276 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
RARAP10276 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.47■□□□□ 0.87
RARAP10276 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.47■□□□□ 0.87
RARAP10276 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.47■□□□□ 0.87
RARAP10276 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
RARAP10276 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RARAP10276 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RARAP10276 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RARAP10276 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RARAP10276 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.46■□□□□ 0.87
RARAP10276 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RARAP10276 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RARAP10276 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.46■□□□□ 0.87
RARAP10276 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RARAP10276 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
RARAP10276 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
RARAP10276 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
RARAP10276 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.46■□□□□ 0.87
RARAP10276 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
RARAP10276 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.46■□□□□ 0.87
RARAP10276 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.46■□□□□ 0.87
RARAP10276 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.46■□□□□ 0.87
RARAP10276 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.46■□□□□ 0.87
RARAP10276 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.46■□□□□ 0.87
RARAP10276 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.46■□□□□ 0.87
RARAP10276 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RARAP10276 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.46■□□□□ 0.87
RARAP10276 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RARAP10276 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RARAP10276 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RARAP10276 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RARAP10276 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
RARAP10276 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RARAP10276 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RARAP10276 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RARAP10276 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.45■□□□□ 0.86
RARAP10276 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RARAP10276 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RARAP10276 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
RARAP10276 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.45■□□□□ 0.86
RARAP10276 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RARAP10276 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
RARAP10276 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.45■□□□□ 0.86
RARAP10276 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.45■□□□□ 0.86
RARAP10276 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.45■□□□□ 0.86
RARAP10276 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
RARAP10276 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.45■□□□□ 0.86
RARAP10276 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.45■□□□□ 0.86
RARAP10276 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RARAP10276 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
RARAP10276 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
RARAP10276 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
RARAP10276 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.45■□□□□ 0.86
RARAP10276 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RARAP10276 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RARAP10276 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.45■□□□□ 0.86
RARAP10276 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RARAP10276 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.45■□□□□ 0.86
RARAP10276 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RARAP10276 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.44■□□□□ 0.86
RARAP10276 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.44■□□□□ 0.86
RARAP10276 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RARAP10276 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
RARAP10276 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
RARAP10276 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
RARAP10276 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RARAP10276 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RARAP10276 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.44■□□□□ 0.86
RARAP10276 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RARAP10276 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.44■□□□□ 0.86
RARAP10276 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.44■□□□□ 0.86
RARAP10276 AC120498.8-201ENST00000614275 531 ntBASIC20.44■□□□□ 0.86
RARAP10276 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RARAP10276 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RARAP10276 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RARAP10276 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.44■□□□□ 0.86
RARAP10276 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.44■□□□□ 0.86
RARAP10276 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RARAP10276 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RARAP10276 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
RARAP10276 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
RARAP10276 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RARAP10276 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RARAP10276 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.43■□□□□ 0.86
RARAP10276 AC093503.3-201ENST00000624917 2352 ntBASIC20.43■□□□□ 0.86
RARAP10276 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.43■□□□□ 0.86
RARAP10276 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
RARAP10276 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.43■□□□□ 0.86
RARAP10276 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RARAP10276 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms