Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CHGBP05060 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CHGBP05060 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CHGBP05060 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC23.5■■□□□ 1.35
CHGBP05060 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CHGBP05060 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC23.5■■□□□ 1.35
CHGBP05060 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
CHGBP05060 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC23.5■■□□□ 1.35
CHGBP05060 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC23.5■■□□□ 1.35
CHGBP05060 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC23.5■■□□□ 1.35
CHGBP05060 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CHGBP05060 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CHGBP05060 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CHGBP05060 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CHGBP05060 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC23.49■■□□□ 1.35
CHGBP05060 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CHGBP05060 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
CHGBP05060 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC23.49■■□□□ 1.35
CHGBP05060 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC23.49■■□□□ 1.35
CHGBP05060 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CHGBP05060 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC23.49■■□□□ 1.35
CHGBP05060 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC23.49■■□□□ 1.35
CHGBP05060 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CHGBP05060 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CHGBP05060 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CHGBP05060 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
CHGBP05060 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CHGBP05060 KRT8P8-201ENST00000434750 1448 ntBASIC23.49■■□□□ 1.35
CHGBP05060 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
CHGBP05060 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CHGBP05060 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CHGBP05060 POLI-202ENST00000406285 2030 ntTSL 2 BASIC23.49■■□□□ 1.35
CHGBP05060 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CHGBP05060 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CHGBP05060 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CHGBP05060 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CHGBP05060 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CHGBP05060 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
CHGBP05060 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CHGBP05060 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CHGBP05060 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
CHGBP05060 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CHGBP05060 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
CHGBP05060 NIFKP9-201ENST00000419265 221 ntBASIC23.48■■□□□ 1.35
CHGBP05060 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC23.48■■□□□ 1.35
CHGBP05060 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC23.48■■□□□ 1.35
CHGBP05060 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC23.48■■□□□ 1.35
CHGBP05060 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC23.48■■□□□ 1.35
CHGBP05060 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
CHGBP05060 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
CHGBP05060 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC23.48■■□□□ 1.35
CHGBP05060 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC23.48■■□□□ 1.35
CHGBP05060 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC23.48■■□□□ 1.35
CHGBP05060 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
CHGBP05060 AC007952.6-201ENST00000573168 2673 ntBASIC23.47■■□□□ 1.35
CHGBP05060 AC003957.1-201ENST00000625108 2673 ntBASIC23.47■■□□□ 1.35
CHGBP05060 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CHGBP05060 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC23.47■■□□□ 1.35
CHGBP05060 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CHGBP05060 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC23.47■■□□□ 1.35
CHGBP05060 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CHGBP05060 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CHGBP05060 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC23.47■■□□□ 1.35
CHGBP05060 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC23.47■■□□□ 1.35
CHGBP05060 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC23.47■■□□□ 1.35
CHGBP05060 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC23.47■■□□□ 1.35
CHGBP05060 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC23.47■■□□□ 1.35
CHGBP05060 MIR4497-201ENST00000583208 89 ntBASIC23.47■■□□□ 1.35
CHGBP05060 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC23.47■■□□□ 1.35
CHGBP05060 CD177P1-201ENST00000606252 935 ntBASIC23.47■■□□□ 1.35
CHGBP05060 CR392000.1-201ENST00000624770 1228 ntBASIC23.47■■□□□ 1.35
CHGBP05060 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC23.47■■□□□ 1.35
CHGBP05060 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CHGBP05060 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC23.47■■□□□ 1.35
CHGBP05060 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CHGBP05060 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CHGBP05060 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CHGBP05060 Z82202.1-201ENST00000623446 1880 ntBASIC23.47■■□□□ 1.35
CHGBP05060 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
CHGBP05060 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
CHGBP05060 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CHGBP05060 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC23.47■■□□□ 1.35
CHGBP05060 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC23.46■■□□□ 1.35
CHGBP05060 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC23.46■■□□□ 1.35
CHGBP05060 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CHGBP05060 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CHGBP05060 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
CHGBP05060 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC23.46■■□□□ 1.35
CHGBP05060 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC23.46■■□□□ 1.35
CHGBP05060 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CHGBP05060 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC23.46■■□□□ 1.35
CHGBP05060 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC23.46■■□□□ 1.35
CHGBP05060 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC23.46■■□□□ 1.35
CHGBP05060 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC23.46■■□□□ 1.35
CHGBP05060 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC23.46■■□□□ 1.35
CHGBP05060 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CHGBP05060 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CHGBP05060 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
CHGBP05060 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
CHGBP05060 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms