Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
APOBP04114 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
APOBP04114 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
APOBP04114 ECEL1P1-201ENST00000373592 1742 ntBASIC12.21□□□□□ -0.45
APOBP04114 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC12.21□□□□□ -0.45
APOBP04114 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
APOBP04114 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
APOBP04114 LY6E-213ENST00000522528 606 ntTSL 3 BASIC12.21□□□□□ -0.45
APOBP04114 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC12.21□□□□□ -0.45
APOBP04114 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
APOBP04114 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
APOBP04114 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
APOBP04114 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
APOBP04114 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
APOBP04114 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
APOBP04114 PLK5-205ENST00000642079 1969 ntBASIC12.21□□□□□ -0.45
APOBP04114 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
APOBP04114 MIR3652-201ENST00000579335 131 ntBASIC12.21□□□□□ -0.45
APOBP04114 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
APOBP04114 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC12.21□□□□□ -0.45
APOBP04114 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
APOBP04114 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
APOBP04114 MYB-221ENST00000527615 2381 ntTSL 5 BASIC12.21□□□□□ -0.46
APOBP04114 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
APOBP04114 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
APOBP04114 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
APOBP04114 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
APOBP04114 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC12.21□□□□□ -0.46
APOBP04114 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
APOBP04114 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
APOBP04114 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
APOBP04114 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
APOBP04114 TMEM179-206ENST00000616017 1645 ntBASIC12.21□□□□□ -0.46
APOBP04114 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC12.21□□□□□ -0.46
APOBP04114 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
APOBP04114 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
APOBP04114 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
APOBP04114 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC12.2□□□□□ -0.46
APOBP04114 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
APOBP04114 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
APOBP04114 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
APOBP04114 AC092183.1-201ENST00000469884 875 ntBASIC12.2□□□□□ -0.46
APOBP04114 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC12.2□□□□□ -0.46
APOBP04114 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
APOBP04114 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
APOBP04114 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
APOBP04114 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
APOBP04114 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
APOBP04114 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
APOBP04114 ILF2-202ENST00000368681 726 ntTSL 2 BASIC12.2□□□□□ -0.46
APOBP04114 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC12.2□□□□□ -0.46
APOBP04114 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC12.2□□□□□ -0.46
APOBP04114 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC12.2□□□□□ -0.46
APOBP04114 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
APOBP04114 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC12.2□□□□□ -0.46
APOBP04114 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
APOBP04114 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
APOBP04114 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
APOBP04114 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
APOBP04114 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
APOBP04114 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
APOBP04114 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
APOBP04114 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
APOBP04114 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
APOBP04114 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
APOBP04114 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
APOBP04114 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC12.19□□□□□ -0.46
APOBP04114 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
APOBP04114 AKR1C7P-201ENST00000305623 895 ntBASIC12.19□□□□□ -0.46
APOBP04114 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
APOBP04114 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC12.19□□□□□ -0.46
APOBP04114 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
APOBP04114 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC12.19□□□□□ -0.46
APOBP04114 HBZP1-201ENST00000354915 429 ntBASIC12.19□□□□□ -0.46
APOBP04114 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
APOBP04114 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
APOBP04114 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC12.19□□□□□ -0.46
APOBP04114 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
APOBP04114 SLC25A1P1-201ENST00000528351 927 ntBASIC12.19□□□□□ -0.46
APOBP04114 TPSP2-201ENST00000561760 610 ntBASIC12.19□□□□□ -0.46
APOBP04114 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
APOBP04114 NME4-212ENST00000621774 904 ntTSL 3 BASIC12.19□□□□□ -0.46
APOBP04114 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
APOBP04114 AC233723.2-201ENST00000623798 2106 ntBASIC12.19□□□□□ -0.46
APOBP04114 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
APOBP04114 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
APOBP04114 AL022342.1-201ENST00000400363 863 ntBASIC12.19□□□□□ -0.46
APOBP04114 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC12.19□□□□□ -0.46
APOBP04114 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
APOBP04114 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC12.19□□□□□ -0.46
APOBP04114 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
APOBP04114 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC12.19□□□□□ -0.46
APOBP04114 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC12.19□□□□□ -0.46
APOBP04114 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
APOBP04114 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
APOBP04114 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
APOBP04114 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
APOBP04114 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
APOBP04114 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
APOBP04114 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms