Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT6AP02538 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.88■□□□□ 0.61
KRT6AP02538 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
KRT6AP02538 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
KRT6AP02538 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT6AP02538 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT6AP02538 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT6AP02538 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
KRT6AP02538 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
KRT6AP02538 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
KRT6AP02538 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
KRT6AP02538 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.88■□□□□ 0.61
KRT6AP02538 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.88■□□□□ 0.61
KRT6AP02538 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.88■□□□□ 0.61
KRT6AP02538 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT6AP02538 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.88■□□□□ 0.61
KRT6AP02538 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
KRT6AP02538 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT6AP02538 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.88■□□□□ 0.61
KRT6AP02538 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
KRT6AP02538 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
KRT6AP02538 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT6AP02538 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
KRT6AP02538 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT6AP02538 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.88■□□□□ 0.61
KRT6AP02538 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
KRT6AP02538 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
KRT6AP02538 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.88■□□□□ 0.61
KRT6AP02538 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT6AP02538 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
KRT6AP02538 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT6AP02538 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT6AP02538 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT6AP02538 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
KRT6AP02538 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT6AP02538 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT6AP02538 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT6AP02538 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
KRT6AP02538 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.87■□□□□ 0.61
KRT6AP02538 GUSBP6-202ENST00000438529 1198 ntBASIC18.87■□□□□ 0.61
KRT6AP02538 AC097658.1-201ENST00000475555 843 ntBASIC18.87■□□□□ 0.61
KRT6AP02538 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
KRT6AP02538 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.87■□□□□ 0.61
KRT6AP02538 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.87■□□□□ 0.61
KRT6AP02538 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT6AP02538 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT6AP02538 AC006557.6-201ENST00000623071 864 ntBASIC18.87■□□□□ 0.61
KRT6AP02538 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
KRT6AP02538 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.86■□□□□ 0.61
KRT6AP02538 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT6AP02538 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.86■□□□□ 0.61
KRT6AP02538 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT6AP02538 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.86■□□□□ 0.61
KRT6AP02538 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.86■□□□□ 0.61
KRT6AP02538 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KRT6AP02538 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.86■□□□□ 0.61
KRT6AP02538 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
KRT6AP02538 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.86■□□□□ 0.61
KRT6AP02538 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.86■□□□□ 0.61
KRT6AP02538 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
KRT6AP02538 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.86■□□□□ 0.61
KRT6AP02538 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.86■□□□□ 0.61
KRT6AP02538 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.86■□□□□ 0.61
KRT6AP02538 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT6AP02538 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
KRT6AP02538 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT6AP02538 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
KRT6AP02538 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KRT6AP02538 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KRT6AP02538 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KRT6AP02538 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.85■□□□□ 0.61
KRT6AP02538 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.85■□□□□ 0.61
KRT6AP02538 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.85■□□□□ 0.61
KRT6AP02538 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT6AP02538 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
KRT6AP02538 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.85■□□□□ 0.61
KRT6AP02538 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
KRT6AP02538 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT6AP02538 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
KRT6AP02538 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KRT6AP02538 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.85■□□□□ 0.61
KRT6AP02538 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KRT6AP02538 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.85■□□□□ 0.61
KRT6AP02538 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KRT6AP02538 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KRT6AP02538 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.85■□□□□ 0.61
KRT6AP02538 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.85■□□□□ 0.61
KRT6AP02538 HLA-B-256ENST00000639848 1089 ntBASIC18.85■□□□□ 0.61
KRT6AP02538 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
KRT6AP02538 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KRT6AP02538 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KRT6AP02538 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
KRT6AP02538 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
KRT6AP02538 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT6AP02538 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.85■□□□□ 0.61
KRT6AP02538 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT6AP02538 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT6AP02538 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
KRT6AP02538 AC092368.3-202ENST00000574180 1591 ntBASIC18.85■□□□□ 0.61
KRT6AP02538 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms