Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.85■□□□□ 0.29
HLA-DQB1P01920 AL356652.1-201ENST00000615962 565 ntBASIC16.85■□□□□ 0.29
HLA-DQB1P01920 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.85■□□□□ 0.29
HLA-DQB1P01920 MIR6084-201ENST00000622012 110 ntBASIC16.85■□□□□ 0.29
HLA-DQB1P01920 DUX4L6-201ENST00000626483 1275 ntBASIC16.85■□□□□ 0.29
HLA-DQB1P01920 DUX4L1-201ENST00000627662 1275 ntBASIC16.85■□□□□ 0.29
HLA-DQB1P01920 DUX4L8-201ENST00000629013 1275 ntBASIC16.85■□□□□ 0.29
HLA-DQB1P01920 DUX4L3-201ENST00000630187 1275 ntBASIC16.85■□□□□ 0.29
HLA-DQB1P01920 DUX4L7-201ENST00000630678 1275 ntBASIC16.85■□□□□ 0.29
HLA-DQB1P01920 DUX4L5-201ENST00000630834 1275 ntBASIC16.85■□□□□ 0.29
HLA-DQB1P01920 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.85■□□□□ 0.29
HLA-DQB1P01920 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
HLA-DQB1P01920 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.85■□□□□ 0.29
HLA-DQB1P01920 FP475955.4-201ENST00000623131 1990 ntBASIC16.85■□□□□ 0.29
HLA-DQB1P01920 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQB1P01920 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.85■□□□□ 0.29
HLA-DQB1P01920 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
HLA-DQB1P01920 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.85■□□□□ 0.29
HLA-DQB1P01920 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
HLA-DQB1P01920 KRT8P17-201ENST00000453110 1448 ntBASIC16.85■□□□□ 0.29
HLA-DQB1P01920 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.85■□□□□ 0.29
HLA-DQB1P01920 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.85■□□□□ 0.29
HLA-DQB1P01920 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DQB1P01920 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
HLA-DQB1P01920 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.85■□□□□ 0.29
HLA-DQB1P01920 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQB1P01920 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
HLA-DQB1P01920 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQB1P01920 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
HLA-DQB1P01920 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQB1P01920 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQB1P01920 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQB1P01920 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
HLA-DQB1P01920 IRS3P-201ENST00000223076 1006 ntBASIC16.84■□□□□ 0.29
HLA-DQB1P01920 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
HLA-DQB1P01920 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.84■□□□□ 0.29
HLA-DQB1P01920 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC16.84■□□□□ 0.29
HLA-DQB1P01920 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.84■□□□□ 0.29
HLA-DQB1P01920 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC16.84■□□□□ 0.29
HLA-DQB1P01920 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQB1P01920 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.84■□□□□ 0.29
HLA-DQB1P01920 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.84■□□□□ 0.29
HLA-DQB1P01920 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQB1P01920 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQB1P01920 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQB1P01920 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQB1P01920 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DQB1P01920 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HLA-DQB1P01920 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
HLA-DQB1P01920 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
HLA-DQB1P01920 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.83■□□□□ 0.29
HLA-DQB1P01920 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.83■□□□□ 0.29
HLA-DQB1P01920 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
HLA-DQB1P01920 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DQB1P01920 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DQB1P01920 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DQB1P01920 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DQB1P01920 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DQB1P01920 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DQB1P01920 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
HLA-DQB1P01920 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DQB1P01920 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
HLA-DQB1P01920 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DQB1P01920 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.83■□□□□ 0.28
HLA-DQB1P01920 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.83■□□□□ 0.28
HLA-DQB1P01920 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.83■□□□□ 0.28
HLA-DQB1P01920 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DQB1P01920 CCDC92B-201ENST00000575506 885 ntBASIC16.83■□□□□ 0.28
HLA-DQB1P01920 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC16.83■□□□□ 0.28
HLA-DQB1P01920 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.83■□□□□ 0.28
HLA-DQB1P01920 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DQB1P01920 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.83■□□□□ 0.28
HLA-DQB1P01920 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DQB1P01920 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
HLA-DQB1P01920 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
HLA-DQB1P01920 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
HLA-DQB1P01920 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQB1P01920 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQB1P01920 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQB1P01920 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQB1P01920 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQB1P01920 ABALON-201ENST00000629058 1903 ntBASIC16.82■□□□□ 0.28
HLA-DQB1P01920 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.82■□□□□ 0.28
HLA-DQB1P01920 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQB1P01920 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.82■□□□□ 0.28
HLA-DQB1P01920 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQB1P01920 KRT16P6-202ENST00000425692 1426 ntBASIC16.82■□□□□ 0.28
HLA-DQB1P01920 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC16.82■□□□□ 0.28
HLA-DQB1P01920 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.82■□□□□ 0.28
HLA-DQB1P01920 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQB1P01920 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.82■□□□□ 0.28
HLA-DQB1P01920 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQB1P01920 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQB1P01920 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQB1P01920 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQB1P01920 PGM5P4-201ENST00000421970 445 ntBASIC16.82■□□□□ 0.28
HLA-DQB1P01920 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.82■□□□□ 0.28
HLA-DQB1P01920 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC16.82■□□□□ 0.28
HLA-DQB1P01920 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.82■□□□□ 0.28
HLA-DQB1P01920 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms