Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRBC1P01850 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRBC1P01850 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRBC1P01850 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
TRBC1P01850 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
TRBC1P01850 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.57■□□□□ 0.72
TRBC1P01850 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.57■□□□□ 0.72
TRBC1P01850 TREX1-205ENST00000625293 1783 ntBASIC19.57■□□□□ 0.72
TRBC1P01850 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.57■□□□□ 0.72
TRBC1P01850 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRBC1P01850 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBC1P01850 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TRBC1P01850 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBC1P01850 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBC1P01850 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
TRBC1P01850 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
TRBC1P01850 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBC1P01850 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBC1P01850 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.57■□□□□ 0.72
TRBC1P01850 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.57■□□□□ 0.72
TRBC1P01850 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TRBC1P01850 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBC1P01850 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRBC1P01850 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TRBC1P01850 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.57■□□□□ 0.72
TRBC1P01850 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRBC1P01850 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.57■□□□□ 0.72
TRBC1P01850 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.57■□□□□ 0.72
TRBC1P01850 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBC1P01850 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBC1P01850 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBC1P01850 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRBC1P01850 AL135905.2-201ENST00000584934 1404 ntBASIC19.57■□□□□ 0.72
TRBC1P01850 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBC1P01850 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.57■□□□□ 0.72
TRBC1P01850 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
TRBC1P01850 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.57■□□□□ 0.72
TRBC1P01850 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBC1P01850 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
TRBC1P01850 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.56■□□□□ 0.72
TRBC1P01850 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.56■□□□□ 0.72
TRBC1P01850 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBC1P01850 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRBC1P01850 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.56■□□□□ 0.72
TRBC1P01850 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBC1P01850 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
TRBC1P01850 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.56■□□□□ 0.72
TRBC1P01850 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRBC1P01850 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBC1P01850 AL353807.1-201ENST00000427475 662 ntBASIC19.56■□□□□ 0.72
TRBC1P01850 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRBC1P01850 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRBC1P01850 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRBC1P01850 AC008550.1-201ENST00000511500 884 ntBASIC19.56■□□□□ 0.72
TRBC1P01850 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRBC1P01850 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.56■□□□□ 0.72
TRBC1P01850 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.56■□□□□ 0.72
TRBC1P01850 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.56■□□□□ 0.72
TRBC1P01850 AL353708.3-201ENST00000610272 989 ntBASIC19.56■□□□□ 0.72
TRBC1P01850 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.56■□□□□ 0.72
TRBC1P01850 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBC1P01850 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
TRBC1P01850 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
TRBC1P01850 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
TRBC1P01850 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
TRBC1P01850 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBC1P01850 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRBC1P01850 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBC1P01850 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
TRBC1P01850 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.55■□□□□ 0.72
TRBC1P01850 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRBC1P01850 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
TRBC1P01850 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TRBC1P01850 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBC1P01850 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRBC1P01850 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRBC1P01850 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBC1P01850 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.55■□□□□ 0.72
TRBC1P01850 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBC1P01850 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRBC1P01850 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.55■□□□□ 0.72
TRBC1P01850 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.55■□□□□ 0.72
TRBC1P01850 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.55■□□□□ 0.72
TRBC1P01850 AF186192.3-201ENST00000583427 947 ntBASIC19.55■□□□□ 0.72
TRBC1P01850 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRBC1P01850 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRBC1P01850 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRBC1P01850 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRBC1P01850 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.54■□□□□ 0.72
TRBC1P01850 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRBC1P01850 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.54■□□□□ 0.72
TRBC1P01850 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.54■□□□□ 0.72
TRBC1P01850 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRBC1P01850 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
TRBC1P01850 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
TRBC1P01850 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
TRBC1P01850 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.54■□□□□ 0.72
TRBC1P01850 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRBC1P01850 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRBC1P01850 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms