Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TOP3BO95985 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TOP3BO95985 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TOP3BO95985 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TOP3BO95985 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.96■□□□□ 0.79
TOP3BO95985 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
TOP3BO95985 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TOP3BO95985 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TOP3BO95985 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TOP3BO95985 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TOP3BO95985 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TOP3BO95985 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.96■□□□□ 0.79
TOP3BO95985 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
TOP3BO95985 AP001412.1-201ENST00000608405 714 ntBASIC19.96■□□□□ 0.79
TOP3BO95985 AC100791.3-201ENST00000617619 330 ntBASIC19.96■□□□□ 0.79
TOP3BO95985 AL590326.2-201ENST00000625139 305 ntBASIC19.96■□□□□ 0.79
TOP3BO95985 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TOP3BO95985 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.96■□□□□ 0.79
TOP3BO95985 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TOP3BO95985 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TOP3BO95985 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TOP3BO95985 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.96■□□□□ 0.79
TOP3BO95985 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TOP3BO95985 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TOP3BO95985 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
TOP3BO95985 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TOP3BO95985 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TOP3BO95985 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
TOP3BO95985 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.95■□□□□ 0.78
TOP3BO95985 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TOP3BO95985 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TOP3BO95985 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TOP3BO95985 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TOP3BO95985 PRKY-204ENST00000533551 1019 ntBASIC19.95■□□□□ 0.78
TOP3BO95985 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.95■□□□□ 0.78
TOP3BO95985 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TOP3BO95985 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TOP3BO95985 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TOP3BO95985 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.95■□□□□ 0.78
TOP3BO95985 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
TOP3BO95985 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
TOP3BO95985 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
TOP3BO95985 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TOP3BO95985 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.95■□□□□ 0.78
TOP3BO95985 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TOP3BO95985 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.95■□□□□ 0.78
TOP3BO95985 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TOP3BO95985 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TOP3BO95985 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TOP3BO95985 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.95■□□□□ 0.78
TOP3BO95985 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
TOP3BO95985 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.94■□□□□ 0.78
TOP3BO95985 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TOP3BO95985 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.94■□□□□ 0.78
TOP3BO95985 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
TOP3BO95985 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TOP3BO95985 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.94■□□□□ 0.78
TOP3BO95985 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.94■□□□□ 0.78
TOP3BO95985 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TOP3BO95985 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TOP3BO95985 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TOP3BO95985 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TOP3BO95985 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.94■□□□□ 0.78
TOP3BO95985 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.94■□□□□ 0.78
TOP3BO95985 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
TOP3BO95985 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
TOP3BO95985 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TOP3BO95985 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.94■□□□□ 0.78
TOP3BO95985 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TOP3BO95985 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.94■□□□□ 0.78
TOP3BO95985 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
TOP3BO95985 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TOP3BO95985 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.93■□□□□ 0.78
TOP3BO95985 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
TOP3BO95985 TREX1-205ENST00000625293 1783 ntBASIC19.93■□□□□ 0.78
TOP3BO95985 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TOP3BO95985 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TOP3BO95985 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.93■□□□□ 0.78
TOP3BO95985 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TOP3BO95985 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TOP3BO95985 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TOP3BO95985 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
TOP3BO95985 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
TOP3BO95985 MCRIP2P1-201ENST00000394346 511 ntBASIC19.93■□□□□ 0.78
TOP3BO95985 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.93■□□□□ 0.78
TOP3BO95985 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.93■□□□□ 0.78
TOP3BO95985 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.93■□□□□ 0.78
TOP3BO95985 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TOP3BO95985 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TOP3BO95985 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.93■□□□□ 0.78
TOP3BO95985 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.93■□□□□ 0.78
TOP3BO95985 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TOP3BO95985 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.93■□□□□ 0.78
TOP3BO95985 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
TOP3BO95985 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TOP3BO95985 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
TOP3BO95985 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.93■□□□□ 0.78
TOP3BO95985 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TOP3BO95985 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
TOP3BO95985 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms