Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.16■□□□□ 0.66
CPNE6O95741 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.16■□□□□ 0.66
CPNE6O95741 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE6O95741 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPNE6O95741 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.16■□□□□ 0.66
CPNE6O95741 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CPNE6O95741 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
CPNE6O95741 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE6O95741 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE6O95741 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE6O95741 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE6O95741 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE6O95741 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE6O95741 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE6O95741 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.15■□□□□ 0.66
CPNE6O95741 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE6O95741 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE6O95741 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE6O95741 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
CPNE6O95741 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.15■□□□□ 0.66
CPNE6O95741 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE6O95741 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.15■□□□□ 0.66
CPNE6O95741 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.15■□□□□ 0.66
CPNE6O95741 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE6O95741 FP700111.2-201ENST00000619190 1892 ntBASIC19.15■□□□□ 0.66
CPNE6O95741 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE6O95741 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CPNE6O95741 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE6O95741 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE6O95741 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.15■□□□□ 0.66
CPNE6O95741 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE6O95741 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CPNE6O95741 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.14■□□□□ 0.66
CPNE6O95741 AC098818.2-201ENST00000564925 2320 ntBASIC19.14■□□□□ 0.66
CPNE6O95741 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CPNE6O95741 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CPNE6O95741 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.14■□□□□ 0.66
CPNE6O95741 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPNE6O95741 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPNE6O95741 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CPNE6O95741 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CPNE6O95741 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.14■□□□□ 0.65
CPNE6O95741 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPNE6O95741 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CPNE6O95741 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPNE6O95741 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CPNE6O95741 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPNE6O95741 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.14■□□□□ 0.65
CPNE6O95741 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.14■□□□□ 0.65
CPNE6O95741 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.14■□□□□ 0.65
CPNE6O95741 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CPNE6O95741 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.65
CPNE6O95741 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.14■□□□□ 0.65
CPNE6O95741 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPNE6O95741 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPNE6O95741 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CPNE6O95741 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPNE6O95741 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.13■□□□□ 0.65
CPNE6O95741 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.13■□□□□ 0.65
CPNE6O95741 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.13■□□□□ 0.65
CPNE6O95741 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CPNE6O95741 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE6O95741 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.13■□□□□ 0.65
CPNE6O95741 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.13■□□□□ 0.65
CPNE6O95741 AC097493.4-201ENST00000641197 219 ntBASIC19.13■□□□□ 0.65
CPNE6O95741 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE6O95741 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE6O95741 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
CPNE6O95741 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE6O95741 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE6O95741 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.13■□□□□ 0.65
CPNE6O95741 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE6O95741 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.13■□□□□ 0.65
CPNE6O95741 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE6O95741 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE6O95741 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE6O95741 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE6O95741 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE6O95741 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE6O95741 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE6O95741 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE6O95741 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CPNE6O95741 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CPNE6O95741 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE6O95741 AC020907.5-201ENST00000624372 1936 ntBASIC19.12■□□□□ 0.65
CPNE6O95741 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE6O95741 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.12■□□□□ 0.65
CPNE6O95741 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE6O95741 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE6O95741 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE6O95741 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.12■□□□□ 0.65
CPNE6O95741 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE6O95741 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.12■□□□□ 0.65
CPNE6O95741 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE6O95741 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE6O95741 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE6O95741 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CPNE6O95741 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE6O95741 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE6O95741 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms