Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KDM4BO94953 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KDM4BO94953 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDM4BO94953 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KDM4BO94953 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
KDM4BO94953 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDM4BO94953 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.1■□□□□ 0.33
KDM4BO94953 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDM4BO94953 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.1■□□□□ 0.33
KDM4BO94953 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDM4BO94953 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.1■□□□□ 0.33
KDM4BO94953 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDM4BO94953 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDM4BO94953 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KDM4BO94953 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
KDM4BO94953 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KDM4BO94953 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
KDM4BO94953 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KDM4BO94953 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
KDM4BO94953 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
KDM4BO94953 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KDM4BO94953 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.09■□□□□ 0.33
KDM4BO94953 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
KDM4BO94953 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
KDM4BO94953 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KDM4BO94953 AC016769.1-201ENST00000409132 1010 ntBASIC17.09■□□□□ 0.33
KDM4BO94953 AC026271.2-201ENST00000428091 497 ntBASIC17.09■□□□□ 0.33
KDM4BO94953 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
KDM4BO94953 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KDM4BO94953 AC100791.3-201ENST00000617619 330 ntBASIC17.09■□□□□ 0.33
KDM4BO94953 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
KDM4BO94953 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KDM4BO94953 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
KDM4BO94953 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KDM4BO94953 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KDM4BO94953 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.09■□□□□ 0.33
KDM4BO94953 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
KDM4BO94953 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.09■□□□□ 0.33
KDM4BO94953 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.09■□□□□ 0.33
KDM4BO94953 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KDM4BO94953 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KDM4BO94953 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
KDM4BO94953 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KDM4BO94953 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
KDM4BO94953 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
KDM4BO94953 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
KDM4BO94953 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
KDM4BO94953 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.08■□□□□ 0.33
KDM4BO94953 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.08■□□□□ 0.32
KDM4BO94953 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KDM4BO94953 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.08■□□□□ 0.32
KDM4BO94953 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KDM4BO94953 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.08■□□□□ 0.32
KDM4BO94953 RARRES2P4-201ENST00000514074 484 ntBASIC17.08■□□□□ 0.32
KDM4BO94953 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
KDM4BO94953 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.08■□□□□ 0.32
KDM4BO94953 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
KDM4BO94953 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
KDM4BO94953 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
KDM4BO94953 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
KDM4BO94953 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.08■□□□□ 0.32
KDM4BO94953 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.07■□□□□ 0.32
KDM4BO94953 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.07■□□□□ 0.32
KDM4BO94953 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.07■□□□□ 0.32
KDM4BO94953 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
KDM4BO94953 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KDM4BO94953 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KDM4BO94953 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.07■□□□□ 0.32
KDM4BO94953 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KDM4BO94953 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KDM4BO94953 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
KDM4BO94953 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KDM4BO94953 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KDM4BO94953 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KDM4BO94953 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
KDM4BO94953 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.07■□□□□ 0.32
KDM4BO94953 AC006015.1-201ENST00000429970 570 ntBASIC17.07■□□□□ 0.32
KDM4BO94953 CNN2P6-201ENST00000439038 900 ntBASIC17.07■□□□□ 0.32
KDM4BO94953 DUX4L16-201ENST00000555130 1264 ntBASIC17.07■□□□□ 0.32
KDM4BO94953 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.07■□□□□ 0.32
KDM4BO94953 RARRES2P6-201ENST00000567333 442 ntBASIC17.07■□□□□ 0.32
KDM4BO94953 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.07■□□□□ 0.32
KDM4BO94953 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
KDM4BO94953 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KDM4BO94953 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
KDM4BO94953 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.07■□□□□ 0.32
KDM4BO94953 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
KDM4BO94953 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
KDM4BO94953 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
KDM4BO94953 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
KDM4BO94953 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.07■□□□□ 0.32
KDM4BO94953 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
KDM4BO94953 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.06■□□□□ 0.32
KDM4BO94953 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KDM4BO94953 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.06■□□□□ 0.32
KDM4BO94953 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KDM4BO94953 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KDM4BO94953 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KDM4BO94953 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KDM4BO94953 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms