Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC25.97■■□□□ 1.75
LTN1O94822 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
LTN1O94822 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
LTN1O94822 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
LTN1O94822 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
LTN1O94822 AC092647.4-201ENST00000457211 535 ntBASIC25.97■■□□□ 1.75
LTN1O94822 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC25.97■■□□□ 1.75
LTN1O94822 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC25.97■■□□□ 1.75
LTN1O94822 DET1-207ENST00000564406 2315 ntTSL 2 BASIC25.97■■□□□ 1.75
LTN1O94822 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
LTN1O94822 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
LTN1O94822 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
LTN1O94822 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
LTN1O94822 DBP-204ENST00000599385 709 ntTSL 3 BASIC25.96■■□□□ 1.75
LTN1O94822 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
LTN1O94822 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC25.96■■□□□ 1.75
LTN1O94822 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC25.96■■□□□ 1.75
LTN1O94822 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
LTN1O94822 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC25.96■■□□□ 1.75
LTN1O94822 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
LTN1O94822 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
LTN1O94822 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.75
LTN1O94822 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC25.95■■□□□ 1.75
LTN1O94822 TSPY5P-201ENST00000426936 936 ntBASIC25.95■■□□□ 1.75
LTN1O94822 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
LTN1O94822 DUSP5P1-201ENST00000441325 1139 ntBASIC25.95■■□□□ 1.75
LTN1O94822 AC009947.2-201ENST00000444014 672 ntBASIC25.95■■□□□ 1.75
LTN1O94822 AC112907.2-201ENST00000448639 330 ntBASIC25.95■■□□□ 1.75
LTN1O94822 KRT18P38-201ENST00000449496 1282 ntBASIC25.95■■□□□ 1.75
LTN1O94822 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
LTN1O94822 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
LTN1O94822 TOLLIP-AS1-201ENST00000530897 939 ntBASIC25.95■■□□□ 1.75
LTN1O94822 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
LTN1O94822 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC25.95■■□□□ 1.75
LTN1O94822 KRT8P11-201ENST00000409686 1436 ntBASIC25.95■■□□□ 1.75
LTN1O94822 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
LTN1O94822 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
LTN1O94822 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC25.95■■□□□ 1.74
LTN1O94822 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
LTN1O94822 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC25.95■■□□□ 1.74
LTN1O94822 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
LTN1O94822 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
LTN1O94822 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
LTN1O94822 BX664615.1-201ENST00000443558 458 ntBASIC25.95■■□□□ 1.74
LTN1O94822 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
LTN1O94822 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC25.95■■□□□ 1.74
LTN1O94822 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC25.95■■□□□ 1.74
LTN1O94822 AC069148.1-201ENST00000608741 768 ntBASIC25.95■■□□□ 1.74
LTN1O94822 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC25.94■■□□□ 1.74
LTN1O94822 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
LTN1O94822 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC25.94■■□□□ 1.74
LTN1O94822 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
LTN1O94822 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
LTN1O94822 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
LTN1O94822 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC25.94■■□□□ 1.74
LTN1O94822 AC091076.1-201ENST00000610741 619 ntBASIC25.94■■□□□ 1.74
LTN1O94822 AL121956.5-201ENST00000625261 221 ntBASIC25.94■■□□□ 1.74
LTN1O94822 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
LTN1O94822 AL512408.1-201ENST00000569378 2000 ntBASIC25.94■■□□□ 1.74
LTN1O94822 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
LTN1O94822 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
LTN1O94822 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC25.93■■□□□ 1.74
LTN1O94822 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC25.93■■□□□ 1.74
LTN1O94822 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC25.93■■□□□ 1.74
LTN1O94822 BET1L-202ENST00000332865 533 ntTSL 5 BASIC25.93■■□□□ 1.74
LTN1O94822 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
LTN1O94822 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
LTN1O94822 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC25.93■■□□□ 1.74
LTN1O94822 FAM86EP-206ENST00000510506 987 ntBASIC25.93■■□□□ 1.74
LTN1O94822 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC25.93■■□□□ 1.74
LTN1O94822 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
LTN1O94822 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
LTN1O94822 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
LTN1O94822 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
LTN1O94822 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
LTN1O94822 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC25.92■■□□□ 1.74
LTN1O94822 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC25.92■■□□□ 1.74
LTN1O94822 AL671277.2-201ENST00000458060 996 ntBASIC25.92■■□□□ 1.74
LTN1O94822 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC25.92■■□□□ 1.74
LTN1O94822 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC25.92■■□□□ 1.74
LTN1O94822 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC25.92■■□□□ 1.74
LTN1O94822 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC25.92■■□□□ 1.74
LTN1O94822 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
LTN1O94822 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC25.92■■□□□ 1.74
LTN1O94822 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
LTN1O94822 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
LTN1O94822 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
LTN1O94822 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC25.92■■□□□ 1.74
LTN1O94822 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
LTN1O94822 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
LTN1O94822 PCED1CP-201ENST00000419887 785 ntBASIC25.92■■□□□ 1.74
LTN1O94822 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC25.92■■□□□ 1.74
LTN1O94822 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
LTN1O94822 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC25.92■■□□□ 1.74
LTN1O94822 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
LTN1O94822 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
LTN1O94822 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
LTN1O94822 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
LTN1O94822 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
LTN1O94822 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms