Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HCN1O60741 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HCN1O60741 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HCN1O60741 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HCN1O60741 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HCN1O60741 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HCN1O60741 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HCN1O60741 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HCN1O60741 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HCN1O60741 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HCN1O60741 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.2■□□□□ 0.5
HCN1O60741 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
HCN1O60741 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
HCN1O60741 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.2■□□□□ 0.5
HCN1O60741 AC233263.1-201ENST00000578059 224 ntBASIC18.2■□□□□ 0.5
HCN1O60741 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.2■□□□□ 0.5
HCN1O60741 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HCN1O60741 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HCN1O60741 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.2■□□□□ 0.5
HCN1O60741 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.2■□□□□ 0.5
HCN1O60741 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
HCN1O60741 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HCN1O60741 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.2■□□□□ 0.5
HCN1O60741 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HCN1O60741 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HCN1O60741 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HCN1O60741 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
HCN1O60741 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.2■□□□□ 0.5
HCN1O60741 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
HCN1O60741 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
HCN1O60741 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HCN1O60741 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HCN1O60741 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HCN1O60741 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HCN1O60741 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.19■□□□□ 0.5
HCN1O60741 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HCN1O60741 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
HCN1O60741 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.19■□□□□ 0.5
HCN1O60741 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HCN1O60741 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HCN1O60741 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HCN1O60741 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.19■□□□□ 0.5
HCN1O60741 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.19■□□□□ 0.5
HCN1O60741 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HCN1O60741 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.19■□□□□ 0.5
HCN1O60741 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.19■□□□□ 0.5
HCN1O60741 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
HCN1O60741 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.19■□□□□ 0.5
HCN1O60741 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.19■□□□□ 0.5
HCN1O60741 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
HCN1O60741 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HCN1O60741 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HCN1O60741 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.19■□□□□ 0.5
HCN1O60741 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
HCN1O60741 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HCN1O60741 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HCN1O60741 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.19■□□□□ 0.5
HCN1O60741 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.19■□□□□ 0.5
HCN1O60741 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HCN1O60741 AC098818.2-201ENST00000564925 2320 ntBASIC18.18■□□□□ 0.5
HCN1O60741 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HCN1O60741 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HCN1O60741 AL691432.2-201ENST00000607222 2038 ntBASIC18.18■□□□□ 0.5
HCN1O60741 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
HCN1O60741 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HCN1O60741 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.18■□□□□ 0.5
HCN1O60741 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HCN1O60741 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HCN1O60741 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
HCN1O60741 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HCN1O60741 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HCN1O60741 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HCN1O60741 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.18■□□□□ 0.5
HCN1O60741 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.18■□□□□ 0.5
HCN1O60741 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
HCN1O60741 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.18■□□□□ 0.5
HCN1O60741 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
HCN1O60741 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.18■□□□□ 0.5
HCN1O60741 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HCN1O60741 RPS2P4-201ENST00000476944 856 ntBASIC18.18■□□□□ 0.5
HCN1O60741 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.18■□□□□ 0.5
HCN1O60741 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.18■□□□□ 0.5
HCN1O60741 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.18■□□□□ 0.5
HCN1O60741 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HCN1O60741 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.18■□□□□ 0.5
HCN1O60741 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
HCN1O60741 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.18■□□□□ 0.5
HCN1O60741 MTDHP1-201ENST00000605323 784 ntBASIC18.18■□□□□ 0.5
HCN1O60741 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HCN1O60741 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HCN1O60741 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.18■□□□□ 0.5
HCN1O60741 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HCN1O60741 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HCN1O60741 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
HCN1O60741 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HCN1O60741 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HCN1O60741 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HCN1O60741 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HCN1O60741 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HCN1O60741 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms