Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.31■□□□□ 0.68
KLHL41O60662 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.31■□□□□ 0.68
KLHL41O60662 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.31■□□□□ 0.68
KLHL41O60662 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KLHL41O60662 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.31■□□□□ 0.68
KLHL41O60662 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
KLHL41O60662 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KLHL41O60662 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.31■□□□□ 0.68
KLHL41O60662 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.31■□□□□ 0.68
KLHL41O60662 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.31■□□□□ 0.68
KLHL41O60662 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
KLHL41O60662 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KLHL41O60662 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.31■□□□□ 0.68
KLHL41O60662 AC009237.14-201ENST00000609975 1594 ntBASIC19.31■□□□□ 0.68
KLHL41O60662 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
KLHL41O60662 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KLHL41O60662 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KLHL41O60662 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KLHL41O60662 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
KLHL41O60662 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KLHL41O60662 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.3■□□□□ 0.68
KLHL41O60662 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.3■□□□□ 0.68
KLHL41O60662 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.3■□□□□ 0.68
KLHL41O60662 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KLHL41O60662 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
KLHL41O60662 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KLHL41O60662 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KLHL41O60662 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KLHL41O60662 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
KLHL41O60662 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
KLHL41O60662 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
KLHL41O60662 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.3■□□□□ 0.68
KLHL41O60662 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
KLHL41O60662 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
KLHL41O60662 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.3■□□□□ 0.68
KLHL41O60662 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KLHL41O60662 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
KLHL41O60662 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KLHL41O60662 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
KLHL41O60662 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KLHL41O60662 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
KLHL41O60662 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
KLHL41O60662 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KLHL41O60662 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KLHL41O60662 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.29■□□□□ 0.68
KLHL41O60662 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.29■□□□□ 0.68
KLHL41O60662 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KLHL41O60662 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KLHL41O60662 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KLHL41O60662 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
KLHL41O60662 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KLHL41O60662 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KLHL41O60662 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
KLHL41O60662 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KLHL41O60662 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.29■□□□□ 0.68
KLHL41O60662 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.29■□□□□ 0.68
KLHL41O60662 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.29■□□□□ 0.68
KLHL41O60662 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.29■□□□□ 0.68
KLHL41O60662 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KLHL41O60662 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KLHL41O60662 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KLHL41O60662 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KLHL41O60662 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
KLHL41O60662 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KLHL41O60662 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KLHL41O60662 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KLHL41O60662 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
KLHL41O60662 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
KLHL41O60662 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
KLHL41O60662 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KLHL41O60662 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
KLHL41O60662 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KLHL41O60662 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KLHL41O60662 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.28■□□□□ 0.68
KLHL41O60662 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.28■□□□□ 0.68
KLHL41O60662 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.28■□□□□ 0.68
KLHL41O60662 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KLHL41O60662 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.28■□□□□ 0.68
KLHL41O60662 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
KLHL41O60662 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
KLHL41O60662 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.28■□□□□ 0.68
KLHL41O60662 DUSP5P2-201ENST00000426873 1033 ntBASIC19.28■□□□□ 0.68
KLHL41O60662 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.28■□□□□ 0.68
KLHL41O60662 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.28■□□□□ 0.68
KLHL41O60662 AL356652.1-201ENST00000615962 565 ntBASIC19.28■□□□□ 0.68
KLHL41O60662 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KLHL41O60662 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KLHL41O60662 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
KLHL41O60662 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KLHL41O60662 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
KLHL41O60662 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KLHL41O60662 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
KLHL41O60662 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
KLHL41O60662 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
KLHL41O60662 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KLHL41O60662 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.27■□□□□ 0.68
KLHL41O60662 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KLHL41O60662 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KLHL41O60662 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
KLHL41O60662 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms