Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LCMT2O60294 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LCMT2O60294 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
LCMT2O60294 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.68■□□□□ 0.58
LCMT2O60294 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LCMT2O60294 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
LCMT2O60294 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
LCMT2O60294 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LCMT2O60294 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LCMT2O60294 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.67■□□□□ 0.58
LCMT2O60294 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LCMT2O60294 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LCMT2O60294 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LCMT2O60294 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LCMT2O60294 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LCMT2O60294 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LCMT2O60294 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.67■□□□□ 0.58
LCMT2O60294 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.67■□□□□ 0.58
LCMT2O60294 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
LCMT2O60294 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
LCMT2O60294 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.67■□□□□ 0.58
LCMT2O60294 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LCMT2O60294 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
LCMT2O60294 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
LCMT2O60294 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
LCMT2O60294 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
LCMT2O60294 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LCMT2O60294 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.67■□□□□ 0.58
LCMT2O60294 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
LCMT2O60294 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
LCMT2O60294 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
LCMT2O60294 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LCMT2O60294 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LCMT2O60294 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LCMT2O60294 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.66■□□□□ 0.58
LCMT2O60294 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LCMT2O60294 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LCMT2O60294 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LCMT2O60294 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
LCMT2O60294 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LCMT2O60294 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
LCMT2O60294 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LCMT2O60294 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LCMT2O60294 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LCMT2O60294 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.66■□□□□ 0.58
LCMT2O60294 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.66■□□□□ 0.58
LCMT2O60294 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.66■□□□□ 0.58
LCMT2O60294 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LCMT2O60294 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.66■□□□□ 0.58
LCMT2O60294 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.66■□□□□ 0.58
LCMT2O60294 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
LCMT2O60294 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LCMT2O60294 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LCMT2O60294 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
LCMT2O60294 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.66■□□□□ 0.58
LCMT2O60294 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
LCMT2O60294 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LCMT2O60294 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LCMT2O60294 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LCMT2O60294 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
LCMT2O60294 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
LCMT2O60294 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LCMT2O60294 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LCMT2O60294 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LCMT2O60294 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LCMT2O60294 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.66■□□□□ 0.58
LCMT2O60294 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LCMT2O60294 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
LCMT2O60294 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LCMT2O60294 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LCMT2O60294 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LCMT2O60294 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
LCMT2O60294 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LCMT2O60294 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
LCMT2O60294 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.65■□□□□ 0.58
LCMT2O60294 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.65■□□□□ 0.58
LCMT2O60294 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
LCMT2O60294 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.65■□□□□ 0.58
LCMT2O60294 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LCMT2O60294 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LCMT2O60294 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LCMT2O60294 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LCMT2O60294 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LCMT2O60294 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.65■□□□□ 0.58
LCMT2O60294 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LCMT2O60294 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.65■□□□□ 0.58
LCMT2O60294 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.65■□□□□ 0.58
LCMT2O60294 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
LCMT2O60294 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LCMT2O60294 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
LCMT2O60294 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
LCMT2O60294 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LCMT2O60294 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.64■□□□□ 0.57
LCMT2O60294 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.64■□□□□ 0.57
LCMT2O60294 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LCMT2O60294 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
LCMT2O60294 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
LCMT2O60294 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.64■□□□□ 0.57
LCMT2O60294 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.64■□□□□ 0.57
LCMT2O60294 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms