Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
XRCC2O43543 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
XRCC2O43543 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
XRCC2O43543 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
XRCC2O43543 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.94■□□□□ 0.3
XRCC2O43543 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.94■□□□□ 0.3
XRCC2O43543 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
XRCC2O43543 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.94■□□□□ 0.3
XRCC2O43543 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.94■□□□□ 0.3
XRCC2O43543 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
XRCC2O43543 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
XRCC2O43543 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
XRCC2O43543 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
XRCC2O43543 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.94■□□□□ 0.3
XRCC2O43543 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
XRCC2O43543 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
XRCC2O43543 AC116562.4-201ENST00000641316 2276 ntBASIC16.94■□□□□ 0.3
XRCC2O43543 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
XRCC2O43543 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.94■□□□□ 0.3
XRCC2O43543 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
XRCC2O43543 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
XRCC2O43543 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
XRCC2O43543 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
XRCC2O43543 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
XRCC2O43543 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
XRCC2O43543 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
XRCC2O43543 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
XRCC2O43543 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
XRCC2O43543 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
XRCC2O43543 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
XRCC2O43543 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
XRCC2O43543 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
XRCC2O43543 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.93■□□□□ 0.3
XRCC2O43543 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.93■□□□□ 0.3
XRCC2O43543 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
XRCC2O43543 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.93■□□□□ 0.3
XRCC2O43543 AC008687.6-201ENST00000596318 630 ntBASIC16.93■□□□□ 0.3
XRCC2O43543 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
XRCC2O43543 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
XRCC2O43543 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
XRCC2O43543 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
XRCC2O43543 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.93■□□□□ 0.3
XRCC2O43543 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
XRCC2O43543 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
XRCC2O43543 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
XRCC2O43543 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
XRCC2O43543 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
XRCC2O43543 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
XRCC2O43543 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
XRCC2O43543 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
XRCC2O43543 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
XRCC2O43543 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
XRCC2O43543 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.92■□□□□ 0.3
XRCC2O43543 AP006587.1-201ENST00000534129 1502 ntBASIC16.92■□□□□ 0.3
XRCC2O43543 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
XRCC2O43543 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
XRCC2O43543 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
XRCC2O43543 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
XRCC2O43543 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
XRCC2O43543 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
XRCC2O43543 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
XRCC2O43543 ID1-201ENST00000376105 1233 ntBASIC16.92■□□□□ 0.3
XRCC2O43543 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.92■□□□□ 0.3
XRCC2O43543 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.92■□□□□ 0.3
XRCC2O43543 AL121829.2-201ENST00000620908 328 ntBASIC16.92■□□□□ 0.3
XRCC2O43543 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
XRCC2O43543 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.92■□□□□ 0.3
XRCC2O43543 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.92■□□□□ 0.3
XRCC2O43543 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
XRCC2O43543 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
XRCC2O43543 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
XRCC2O43543 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
XRCC2O43543 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.92■□□□□ 0.3
XRCC2O43543 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.92■□□□□ 0.3
XRCC2O43543 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
XRCC2O43543 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
XRCC2O43543 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.92■□□□□ 0.3
XRCC2O43543 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
XRCC2O43543 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.92■□□□□ 0.3
XRCC2O43543 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
XRCC2O43543 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.91■□□□□ 0.3
XRCC2O43543 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
XRCC2O43543 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
XRCC2O43543 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
XRCC2O43543 AC093484.2-201ENST00000580996 2166 ntBASIC16.91■□□□□ 0.3
XRCC2O43543 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
XRCC2O43543 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
XRCC2O43543 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
XRCC2O43543 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
XRCC2O43543 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.91■□□□□ 0.3
XRCC2O43543 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
XRCC2O43543 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
XRCC2O43543 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
XRCC2O43543 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
XRCC2O43543 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.91■□□□□ 0.3
XRCC2O43543 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
XRCC2O43543 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.91■□□□□ 0.3
XRCC2O43543 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
XRCC2O43543 YBX1P10-201ENST00000444752 975 ntBASIC16.91■□□□□ 0.3
XRCC2O43543 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms