Protein–RNA interactions for Protein: O15499

GSC2, Homeobox protein goosecoid-2, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSC2O15499 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
GSC2O15499 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.76■□□□□ 0.59
GSC2O15499 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GSC2O15499 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.76■□□□□ 0.59
GSC2O15499 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GSC2O15499 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GSC2O15499 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GSC2O15499 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GSC2O15499 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GSC2O15499 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GSC2O15499 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
GSC2O15499 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GSC2O15499 AL512353.2-201ENST00000448759 1962 ntBASIC18.76■□□□□ 0.59
GSC2O15499 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
GSC2O15499 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.76■□□□□ 0.59
GSC2O15499 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.76■□□□□ 0.59
GSC2O15499 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.76■□□□□ 0.59
GSC2O15499 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.76■□□□□ 0.59
GSC2O15499 AL358852.1-201ENST00000623174 1268 ntBASIC18.76■□□□□ 0.59
GSC2O15499 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GSC2O15499 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.76■□□□□ 0.59
GSC2O15499 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GSC2O15499 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
GSC2O15499 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GSC2O15499 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.76■□□□□ 0.59
GSC2O15499 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GSC2O15499 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GSC2O15499 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GSC2O15499 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
GSC2O15499 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
GSC2O15499 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GSC2O15499 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GSC2O15499 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
GSC2O15499 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.75■□□□□ 0.59
GSC2O15499 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.75■□□□□ 0.59
GSC2O15499 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GSC2O15499 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
GSC2O15499 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GSC2O15499 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
GSC2O15499 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
GSC2O15499 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GSC2O15499 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GSC2O15499 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
GSC2O15499 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GSC2O15499 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GSC2O15499 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
GSC2O15499 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GSC2O15499 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
GSC2O15499 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.74■□□□□ 0.59
GSC2O15499 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.74■□□□□ 0.59
GSC2O15499 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GSC2O15499 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GSC2O15499 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
GSC2O15499 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GSC2O15499 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
GSC2O15499 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.74■□□□□ 0.59
GSC2O15499 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GSC2O15499 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
GSC2O15499 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
GSC2O15499 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
GSC2O15499 MIR572-201ENST00000384983 95 ntBASIC18.74■□□□□ 0.59
GSC2O15499 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.74■□□□□ 0.59
GSC2O15499 AC010141.2-201ENST00000452426 721 ntBASIC18.74■□□□□ 0.59
GSC2O15499 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.74■□□□□ 0.59
GSC2O15499 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.74■□□□□ 0.59
GSC2O15499 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.74■□□□□ 0.59
GSC2O15499 TPRG1LP1-201ENST00000598702 760 ntBASIC18.74■□□□□ 0.59
GSC2O15499 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.74■□□□□ 0.59
GSC2O15499 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GSC2O15499 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
GSC2O15499 AC139713.2-201ENST00000641328 2723 ntBASIC18.74■□□□□ 0.59
GSC2O15499 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
GSC2O15499 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
GSC2O15499 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
GSC2O15499 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GSC2O15499 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.73■□□□□ 0.59
GSC2O15499 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GSC2O15499 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GSC2O15499 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
GSC2O15499 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GSC2O15499 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.73■□□□□ 0.59
GSC2O15499 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GSC2O15499 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.73■□□□□ 0.59
GSC2O15499 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.73■□□□□ 0.59
GSC2O15499 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.73■□□□□ 0.59
GSC2O15499 AC243732.1-201ENST00000612648 864 ntBASIC18.73■□□□□ 0.59
GSC2O15499 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
GSC2O15499 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.73■□□□□ 0.59
GSC2O15499 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GSC2O15499 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GSC2O15499 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.73■□□□□ 0.59
GSC2O15499 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
GSC2O15499 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
GSC2O15499 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.72■□□□□ 0.59
GSC2O15499 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.72■□□□□ 0.59
GSC2O15499 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GSC2O15499 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
GSC2O15499 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GSC2O15499 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
GSC2O15499 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms