Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.22■□□□□ 0.51
AP3D1O14617 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.22■□□□□ 0.51
AP3D1O14617 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
AP3D1O14617 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP3D1O14617 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP3D1O14617 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP3D1O14617 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.22■□□□□ 0.51
AP3D1O14617 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP3D1O14617 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
AP3D1O14617 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
AP3D1O14617 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP3D1O14617 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP3D1O14617 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.21■□□□□ 0.51
AP3D1O14617 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.21■□□□□ 0.51
AP3D1O14617 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP3D1O14617 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP3D1O14617 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
AP3D1O14617 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.21■□□□□ 0.51
AP3D1O14617 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
AP3D1O14617 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
AP3D1O14617 AC090192.1-201ENST00000517740 490 ntBASIC18.21■□□□□ 0.51
AP3D1O14617 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.21■□□□□ 0.51
AP3D1O14617 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.21■□□□□ 0.51
AP3D1O14617 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.21■□□□□ 0.51
AP3D1O14617 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
AP3D1O14617 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.21■□□□□ 0.51
AP3D1O14617 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP3D1O14617 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP3D1O14617 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP3D1O14617 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
AP3D1O14617 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.21■□□□□ 0.51
AP3D1O14617 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP3D1O14617 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP3D1O14617 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
AP3D1O14617 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP3D1O14617 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
AP3D1O14617 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.2■□□□□ 0.5
AP3D1O14617 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP3D1O14617 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP3D1O14617 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.2■□□□□ 0.5
AP3D1O14617 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
AP3D1O14617 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.2■□□□□ 0.5
AP3D1O14617 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP3D1O14617 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
AP3D1O14617 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.2■□□□□ 0.5
AP3D1O14617 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.2■□□□□ 0.5
AP3D1O14617 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
AP3D1O14617 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP3D1O14617 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.2■□□□□ 0.5
AP3D1O14617 AC023632.3-201ENST00000521633 145 ntBASIC18.2■□□□□ 0.5
AP3D1O14617 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.2■□□□□ 0.5
AP3D1O14617 AC098934.4-201ENST00000564127 592 ntBASIC18.2■□□□□ 0.5
AP3D1O14617 AC092118.2-201ENST00000613495 667 ntBASIC18.2■□□□□ 0.5
AP3D1O14617 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP3D1O14617 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.2■□□□□ 0.5
AP3D1O14617 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP3D1O14617 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
AP3D1O14617 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.2■□□□□ 0.5
AP3D1O14617 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
AP3D1O14617 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.2■□□□□ 0.5
AP3D1O14617 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP3D1O14617 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP3D1O14617 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
AP3D1O14617 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
AP3D1O14617 AP000974.1-201ENST00000623909 2387 ntBASIC18.19■□□□□ 0.5
AP3D1O14617 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP3D1O14617 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP3D1O14617 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.19■□□□□ 0.5
AP3D1O14617 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.19■□□□□ 0.5
AP3D1O14617 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
AP3D1O14617 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP3D1O14617 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP3D1O14617 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP3D1O14617 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.19■□□□□ 0.5
AP3D1O14617 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.19■□□□□ 0.5
AP3D1O14617 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
AP3D1O14617 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP3D1O14617 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.19■□□□□ 0.5
AP3D1O14617 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
AP3D1O14617 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
AP3D1O14617 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.19■□□□□ 0.5
AP3D1O14617 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.19■□□□□ 0.5
AP3D1O14617 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.19■□□□□ 0.5
AP3D1O14617 AL138781.1-201ENST00000566567 1274 ntBASIC18.19■□□□□ 0.5
AP3D1O14617 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.19■□□□□ 0.5
AP3D1O14617 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.19■□□□□ 0.5
AP3D1O14617 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.19■□□□□ 0.5
AP3D1O14617 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP3D1O14617 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP3D1O14617 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
AP3D1O14617 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
AP3D1O14617 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.19■□□□□ 0.5
AP3D1O14617 PHGDH-210ENST00000641115 1638 ntBASIC18.19■□□□□ 0.5
AP3D1O14617 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP3D1O14617 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP3D1O14617 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP3D1O14617 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP3D1O14617 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
AP3D1O14617 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP3D1O14617 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms