Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SLC28A1O00337 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC28A1O00337 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC28A1O00337 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
SLC28A1O00337 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC28A1O00337 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SLC28A1O00337 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC28A1O00337 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SLC28A1O00337 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC28A1O00337 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC28A1O00337 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC28A1O00337 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC28A1O00337 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC28A1O00337 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC28A1O00337 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC28A1O00337 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC28A1O00337 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC28A1O00337 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC28A1O00337 AC083906.2-201ENST00000511578 360 ntBASIC18.77■□□□□ 0.6
SLC28A1O00337 AC092118.2-201ENST00000613495 667 ntBASIC18.77■□□□□ 0.6
SLC28A1O00337 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.77■□□□□ 0.6
SLC28A1O00337 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC28A1O00337 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC28A1O00337 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SLC28A1O00337 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
SLC28A1O00337 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SLC28A1O00337 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
SLC28A1O00337 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SLC28A1O00337 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.77■□□□□ 0.59
SLC28A1O00337 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
SLC28A1O00337 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC28A1O00337 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC28A1O00337 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC28A1O00337 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC28A1O00337 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC28A1O00337 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC28A1O00337 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC28A1O00337 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC28A1O00337 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC28A1O00337 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC28A1O00337 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC28A1O00337 AC006970.2-201ENST00000450065 779 ntBASIC18.76■□□□□ 0.59
SLC28A1O00337 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC28A1O00337 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.76■□□□□ 0.59
SLC28A1O00337 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.76■□□□□ 0.59
SLC28A1O00337 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.76■□□□□ 0.59
SLC28A1O00337 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC28A1O00337 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.76■□□□□ 0.59
SLC28A1O00337 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.76■□□□□ 0.59
SLC28A1O00337 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC28A1O00337 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC28A1O00337 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SLC28A1O00337 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SLC28A1O00337 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC28A1O00337 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC28A1O00337 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC28A1O00337 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SLC28A1O00337 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SLC28A1O00337 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
SLC28A1O00337 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC28A1O00337 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SLC28A1O00337 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLC28A1O00337 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.75■□□□□ 0.59
SLC28A1O00337 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.75■□□□□ 0.59
SLC28A1O00337 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLC28A1O00337 AC006557.6-201ENST00000623071 864 ntBASIC18.75■□□□□ 0.59
SLC28A1O00337 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC28A1O00337 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC28A1O00337 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC28A1O00337 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC28A1O00337 AC004408.2-201ENST00000623613 2777 ntBASIC18.75■□□□□ 0.59
SLC28A1O00337 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC28A1O00337 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC28A1O00337 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
SLC28A1O00337 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC28A1O00337 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.74■□□□□ 0.59
SLC28A1O00337 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
SLC28A1O00337 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC28A1O00337 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC28A1O00337 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC28A1O00337 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC28A1O00337 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC28A1O00337 AC091874.3-201ENST00000512672 1195 ntBASIC18.74■□□□□ 0.59
SLC28A1O00337 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SLC28A1O00337 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SLC28A1O00337 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.74■□□□□ 0.59
SLC28A1O00337 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC28A1O00337 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC28A1O00337 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC28A1O00337 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC28A1O00337 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SLC28A1O00337 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC28A1O00337 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SLC28A1O00337 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.74■□□□□ 0.59
SLC28A1O00337 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SLC28A1O00337 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC28A1O00337 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC28A1O00337 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC28A1O00337 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC28A1O00337 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms