Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.34■□□□□ 0.69
TLR4O00206 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.34■□□□□ 0.69
TLR4O00206 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TLR4O00206 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
TLR4O00206 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.34■□□□□ 0.69
TLR4O00206 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.34■□□□□ 0.69
TLR4O00206 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TLR4O00206 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
TLR4O00206 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TLR4O00206 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
TLR4O00206 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TLR4O00206 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.34■□□□□ 0.69
TLR4O00206 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.33■□□□□ 0.69
TLR4O00206 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TLR4O00206 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TLR4O00206 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
TLR4O00206 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
TLR4O00206 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
TLR4O00206 AC092667.1-201ENST00000434301 2586 ntBASIC19.33■□□□□ 0.69
TLR4O00206 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TLR4O00206 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TLR4O00206 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TLR4O00206 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
TLR4O00206 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TLR4O00206 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
TLR4O00206 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.33■□□□□ 0.68
TLR4O00206 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.33■□□□□ 0.68
TLR4O00206 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.33■□□□□ 0.68
TLR4O00206 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
TLR4O00206 SMG8-203ENST00000578922 2178 ntBASIC19.33■□□□□ 0.68
TLR4O00206 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
TLR4O00206 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TLR4O00206 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TLR4O00206 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.32■□□□□ 0.68
TLR4O00206 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TLR4O00206 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TLR4O00206 CRYGFP-201ENST00000418459 633 ntBASIC19.32■□□□□ 0.68
TLR4O00206 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.32■□□□□ 0.68
TLR4O00206 EGLN1P1-201ENST00000531623 762 ntBASIC19.32■□□□□ 0.68
TLR4O00206 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TLR4O00206 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TLR4O00206 AC130371.2-201ENST00000619443 611 ntBASIC19.32■□□□□ 0.68
TLR4O00206 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.32■□□□□ 0.68
TLR4O00206 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TLR4O00206 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.32■□□□□ 0.68
TLR4O00206 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TLR4O00206 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TLR4O00206 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.32■□□□□ 0.68
TLR4O00206 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TLR4O00206 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TLR4O00206 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TLR4O00206 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TLR4O00206 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TLR4O00206 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
TLR4O00206 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TLR4O00206 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TLR4O00206 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.31■□□□□ 0.68
TLR4O00206 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TLR4O00206 TSPY14P-201ENST00000303979 915 ntBASIC19.31■□□□□ 0.68
TLR4O00206 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.31■□□□□ 0.68
TLR4O00206 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
TLR4O00206 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.31■□□□□ 0.68
TLR4O00206 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.31■□□□□ 0.68
TLR4O00206 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TLR4O00206 FEM1AP1-201ENST00000431297 1995 ntBASIC19.31■□□□□ 0.68
TLR4O00206 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TLR4O00206 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.31■□□□□ 0.68
TLR4O00206 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TLR4O00206 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
TLR4O00206 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.31■□□□□ 0.68
TLR4O00206 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TLR4O00206 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TLR4O00206 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.31■□□□□ 0.68
TLR4O00206 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TLR4O00206 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TLR4O00206 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TLR4O00206 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.3■□□□□ 0.68
TLR4O00206 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
TLR4O00206 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TLR4O00206 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.3■□□□□ 0.68
TLR4O00206 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TLR4O00206 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TLR4O00206 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TLR4O00206 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
TLR4O00206 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.3■□□□□ 0.68
TLR4O00206 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.3■□□□□ 0.68
TLR4O00206 LIN28AP1-201ENST00000429574 405 ntBASIC19.3■□□□□ 0.68
TLR4O00206 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TLR4O00206 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.3■□□□□ 0.68
TLR4O00206 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TLR4O00206 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.3■□□□□ 0.68
TLR4O00206 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
TLR4O00206 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TLR4O00206 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TLR4O00206 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TLR4O00206 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TLR4O00206 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TLR4O00206 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TLR4O00206 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.29■□□□□ 0.68
TLR4O00206 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms