Protein–RNA interactions for Protein: D6RBM5

USP17L23, Putative ubiquitin carboxyl-terminal hydrolase 17-like protein 23, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L23D6RBM5 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USP17L23D6RBM5 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC13.18□□□□□ -0.3
USP17L23D6RBM5 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
USP17L23D6RBM5 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USP17L23D6RBM5 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
USP17L23D6RBM5 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC13.18□□□□□ -0.3
USP17L23D6RBM5 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USP17L23D6RBM5 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USP17L23D6RBM5 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
USP17L23D6RBM5 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USP17L23D6RBM5 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
USP17L23D6RBM5 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC13.18□□□□□ -0.3
USP17L23D6RBM5 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
USP17L23D6RBM5 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC13.18□□□□□ -0.3
USP17L23D6RBM5 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USP17L23D6RBM5 AC006557.6-201ENST00000623071 864 ntBASIC13.18□□□□□ -0.3
USP17L23D6RBM5 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USP17L23D6RBM5 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
USP17L23D6RBM5 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
USP17L23D6RBM5 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
USP17L23D6RBM5 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
USP17L23D6RBM5 USP39-204ENST00000409766 2033 ntTSL 2 BASIC13.18□□□□□ -0.3
USP17L23D6RBM5 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
USP17L23D6RBM5 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USP17L23D6RBM5 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
USP17L23D6RBM5 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC13.18□□□□□ -0.3
USP17L23D6RBM5 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
USP17L23D6RBM5 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USP17L23D6RBM5 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC13.18□□□□□ -0.3
USP17L23D6RBM5 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
USP17L23D6RBM5 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
USP17L23D6RBM5 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC13.18□□□□□ -0.3
USP17L23D6RBM5 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
USP17L23D6RBM5 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
USP17L23D6RBM5 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
USP17L23D6RBM5 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
USP17L23D6RBM5 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
USP17L23D6RBM5 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
USP17L23D6RBM5 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC13.17□□□□□ -0.3
USP17L23D6RBM5 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
USP17L23D6RBM5 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
USP17L23D6RBM5 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
USP17L23D6RBM5 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC13.17□□□□□ -0.3
USP17L23D6RBM5 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
USP17L23D6RBM5 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
USP17L23D6RBM5 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
USP17L23D6RBM5 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
USP17L23D6RBM5 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
USP17L23D6RBM5 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
USP17L23D6RBM5 AFG3L1P-217ENST00000557444 2447 ntBASIC13.17□□□□□ -0.3
USP17L23D6RBM5 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
USP17L23D6RBM5 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
USP17L23D6RBM5 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
USP17L23D6RBM5 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC13.17□□□□□ -0.3
USP17L23D6RBM5 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
USP17L23D6RBM5 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
USP17L23D6RBM5 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC13.17□□□□□ -0.3
USP17L23D6RBM5 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
USP17L23D6RBM5 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC13.17□□□□□ -0.3
USP17L23D6RBM5 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
USP17L23D6RBM5 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
USP17L23D6RBM5 KRT18P6-201ENST00000555540 1265 ntBASIC13.17□□□□□ -0.3
USP17L23D6RBM5 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC13.17□□□□□ -0.3
USP17L23D6RBM5 SOX15-203ENST00000570788 1093 ntBASIC13.17□□□□□ -0.3
USP17L23D6RBM5 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC13.17□□□□□ -0.3
USP17L23D6RBM5 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
USP17L23D6RBM5 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
USP17L23D6RBM5 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
USP17L23D6RBM5 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
USP17L23D6RBM5 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
USP17L23D6RBM5 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
USP17L23D6RBM5 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
USP17L23D6RBM5 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
USP17L23D6RBM5 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC13.17□□□□□ -0.3
USP17L23D6RBM5 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
USP17L23D6RBM5 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
USP17L23D6RBM5 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
USP17L23D6RBM5 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
USP17L23D6RBM5 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
USP17L23D6RBM5 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
USP17L23D6RBM5 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC13.16□□□□□ -0.3
USP17L23D6RBM5 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC13.16□□□□□ -0.3
USP17L23D6RBM5 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
USP17L23D6RBM5 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
USP17L23D6RBM5 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
USP17L23D6RBM5 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
USP17L23D6RBM5 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC13.16□□□□□ -0.3
USP17L23D6RBM5 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC13.16□□□□□ -0.3
USP17L23D6RBM5 CD37-204ENST00000535669 1674 ntTSL 2 BASIC13.16□□□□□ -0.3
USP17L23D6RBM5 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
USP17L23D6RBM5 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC13.16□□□□□ -0.3
USP17L23D6RBM5 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
USP17L23D6RBM5 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC13.16□□□□□ -0.3
USP17L23D6RBM5 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
USP17L23D6RBM5 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
USP17L23D6RBM5 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
USP17L23D6RBM5 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
USP17L23D6RBM5 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
USP17L23D6RBM5 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
USP17L23D6RBM5 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms