Protein–RNA interactions for Protein: B4E1H0

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HB4E1H0 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SUPT3HB4E1H0 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.2■□□□□ 0.66
SUPT3HB4E1H0 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SUPT3HB4E1H0 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SUPT3HB4E1H0 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SUPT3HB4E1H0 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SUPT3HB4E1H0 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SUPT3HB4E1H0 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.2■□□□□ 0.66
SUPT3HB4E1H0 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SUPT3HB4E1H0 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SUPT3HB4E1H0 TFP1-202ENST00000475455 1573 ntBASIC19.19■□□□□ 0.66
SUPT3HB4E1H0 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SUPT3HB4E1H0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SUPT3HB4E1H0 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.19■□□□□ 0.66
SUPT3HB4E1H0 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.19■□□□□ 0.66
SUPT3HB4E1H0 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.19■□□□□ 0.66
SUPT3HB4E1H0 NCF1B-203ENST00000435988 1254 ntBASIC19.19■□□□□ 0.66
SUPT3HB4E1H0 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.19■□□□□ 0.66
SUPT3HB4E1H0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SUPT3HB4E1H0 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SUPT3HB4E1H0 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SUPT3HB4E1H0 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.19■□□□□ 0.66
SUPT3HB4E1H0 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SUPT3HB4E1H0 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SUPT3HB4E1H0 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SUPT3HB4E1H0 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.19■□□□□ 0.66
SUPT3HB4E1H0 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SUPT3HB4E1H0 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SUPT3HB4E1H0 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.19■□□□□ 0.66
SUPT3HB4E1H0 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
SUPT3HB4E1H0 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SUPT3HB4E1H0 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SUPT3HB4E1H0 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SUPT3HB4E1H0 AC124283.5-201ENST00000624661 1809 ntBASIC19.18■□□□□ 0.66
SUPT3HB4E1H0 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.18■□□□□ 0.66
SUPT3HB4E1H0 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SUPT3HB4E1H0 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SUPT3HB4E1H0 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.18■□□□□ 0.66
SUPT3HB4E1H0 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.18■□□□□ 0.66
SUPT3HB4E1H0 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SUPT3HB4E1H0 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SUPT3HB4E1H0 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SUPT3HB4E1H0 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SUPT3HB4E1H0 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.18■□□□□ 0.66
SUPT3HB4E1H0 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SUPT3HB4E1H0 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.18■□□□□ 0.66
SUPT3HB4E1H0 MIR4758-201ENST00000577688 71 ntBASIC19.18■□□□□ 0.66
SUPT3HB4E1H0 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.18■□□□□ 0.66
SUPT3HB4E1H0 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SUPT3HB4E1H0 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.18■□□□□ 0.66
SUPT3HB4E1H0 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SUPT3HB4E1H0 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.18■□□□□ 0.66
SUPT3HB4E1H0 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SUPT3HB4E1H0 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SUPT3HB4E1H0 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SUPT3HB4E1H0 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SUPT3HB4E1H0 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SUPT3HB4E1H0 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SUPT3HB4E1H0 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SUPT3HB4E1H0 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SUPT3HB4E1H0 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SUPT3HB4E1H0 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SUPT3HB4E1H0 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SUPT3HB4E1H0 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SUPT3HB4E1H0 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SUPT3HB4E1H0 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SUPT3HB4E1H0 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SUPT3HB4E1H0 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SUPT3HB4E1H0 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SUPT3HB4E1H0 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SUPT3HB4E1H0 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SUPT3HB4E1H0 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.17■□□□□ 0.66
SUPT3HB4E1H0 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.17■□□□□ 0.66
SUPT3HB4E1H0 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.17■□□□□ 0.66
SUPT3HB4E1H0 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.17■□□□□ 0.66
SUPT3HB4E1H0 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.17■□□□□ 0.66
SUPT3HB4E1H0 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SUPT3HB4E1H0 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SUPT3HB4E1H0 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.17■□□□□ 0.66
SUPT3HB4E1H0 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.17■□□□□ 0.66
SUPT3HB4E1H0 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SUPT3HB4E1H0 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SUPT3HB4E1H0 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.17■□□□□ 0.66
SUPT3HB4E1H0 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SUPT3HB4E1H0 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SUPT3HB4E1H0 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SUPT3HB4E1H0 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SUPT3HB4E1H0 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.16■□□□□ 0.66
SUPT3HB4E1H0 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
SUPT3HB4E1H0 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.16■□□□□ 0.66
SUPT3HB4E1H0 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SUPT3HB4E1H0 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SUPT3HB4E1H0 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.16■□□□□ 0.66
SUPT3HB4E1H0 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SUPT3HB4E1H0 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SUPT3HB4E1H0 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SUPT3HB4E1H0 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.16■□□□□ 0.66
SUPT3HB4E1H0 AC092368.3-202ENST00000574180 1591 ntBASIC19.16■□□□□ 0.66
SUPT3HB4E1H0 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SUPT3HB4E1H0 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms