Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC162PA2VCL2 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.51■□□□□ 0.71
CCDC162PA2VCL2 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC162PA2VCL2 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC162PA2VCL2 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC162PA2VCL2 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC162PA2VCL2 YBX1P10-201ENST00000444752 975 ntBASIC19.51■□□□□ 0.71
CCDC162PA2VCL2 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.51■□□□□ 0.71
CCDC162PA2VCL2 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
CCDC162PA2VCL2 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.51■□□□□ 0.71
CCDC162PA2VCL2 AC233263.1-201ENST00000578059 224 ntBASIC19.51■□□□□ 0.71
CCDC162PA2VCL2 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.51■□□□□ 0.71
CCDC162PA2VCL2 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC162PA2VCL2 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC162PA2VCL2 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC162PA2VCL2 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC162PA2VCL2 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC162PA2VCL2 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC162PA2VCL2 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC162PA2VCL2 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC162PA2VCL2 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC162PA2VCL2 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC162PA2VCL2 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC162PA2VCL2 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC162PA2VCL2 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC162PA2VCL2 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC162PA2VCL2 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC162PA2VCL2 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC162PA2VCL2 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CCDC162PA2VCL2 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC162PA2VCL2 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CCDC162PA2VCL2 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CCDC162PA2VCL2 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC162PA2VCL2 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC162PA2VCL2 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.5■□□□□ 0.71
CCDC162PA2VCL2 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC162PA2VCL2 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC162PA2VCL2 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC162PA2VCL2 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC162PA2VCL2 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC162PA2VCL2 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC162PA2VCL2 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC162PA2VCL2 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CCDC162PA2VCL2 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC162PA2VCL2 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC162PA2VCL2 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC162PA2VCL2 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC162PA2VCL2 AC005332.7-201ENST00000614046 2005 ntBASIC19.49■□□□□ 0.71
CCDC162PA2VCL2 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
CCDC162PA2VCL2 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CCDC162PA2VCL2 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CCDC162PA2VCL2 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC162PA2VCL2 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC162PA2VCL2 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC162PA2VCL2 ESRRAP1-201ENST00000400596 1257 ntBASIC19.49■□□□□ 0.71
CCDC162PA2VCL2 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC162PA2VCL2 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC162PA2VCL2 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.49■□□□□ 0.71
CCDC162PA2VCL2 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC162PA2VCL2 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
CCDC162PA2VCL2 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
CCDC162PA2VCL2 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC162PA2VCL2 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC162PA2VCL2 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.49■□□□□ 0.71
CCDC162PA2VCL2 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC162PA2VCL2 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC162PA2VCL2 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC162PA2VCL2 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CCDC162PA2VCL2 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC162PA2VCL2 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC162PA2VCL2 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC162PA2VCL2 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC162PA2VCL2 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC162PA2VCL2 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC162PA2VCL2 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC162PA2VCL2 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC162PA2VCL2 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.48■□□□□ 0.71
CCDC162PA2VCL2 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC162PA2VCL2 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CCDC162PA2VCL2 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC162PA2VCL2 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.48■□□□□ 0.71
CCDC162PA2VCL2 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC162PA2VCL2 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.48■□□□□ 0.71
CCDC162PA2VCL2 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC162PA2VCL2 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC162PA2VCL2 AC069544.1-201ENST00000609399 999 ntBASIC19.48■□□□□ 0.71
CCDC162PA2VCL2 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.48■□□□□ 0.71
CCDC162PA2VCL2 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC162PA2VCL2 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.48■□□□□ 0.71
CCDC162PA2VCL2 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC162PA2VCL2 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC162PA2VCL2 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC162PA2VCL2 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC162PA2VCL2 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC162PA2VCL2 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CCDC162PA2VCL2 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CCDC162PA2VCL2 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC162PA2VCL2 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CCDC162PA2VCL2 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC162PA2VCL2 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms