Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV4A0A0B4J268 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TRAV4A0A0B4J268 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV4A0A0B4J268 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV4A0A0B4J268 AC120498.9-201ENST00000339021 3867 ntBASIC14.06□□□□□ -0.16
TRAV4A0A0B4J268 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
TRAV4A0A0B4J268 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
TRAV4A0A0B4J268 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
TRAV4A0A0B4J268 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV4A0A0B4J268 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC14.06□□□□□ -0.16
TRAV4A0A0B4J268 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV4A0A0B4J268 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV4A0A0B4J268 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV4A0A0B4J268 WT1-AS_3.1-201ENST00000613262 234 ntBASIC14.06□□□□□ -0.16
TRAV4A0A0B4J268 PFKL-212ENST00000628044 129 ntTSL 3 BASIC14.06□□□□□ -0.16
TRAV4A0A0B4J268 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV4A0A0B4J268 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV4A0A0B4J268 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV4A0A0B4J268 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV4A0A0B4J268 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV4A0A0B4J268 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV4A0A0B4J268 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV4A0A0B4J268 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV4A0A0B4J268 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV4A0A0B4J268 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV4A0A0B4J268 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV4A0A0B4J268 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV4A0A0B4J268 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV4A0A0B4J268 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV4A0A0B4J268 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV4A0A0B4J268 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV4A0A0B4J268 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV4A0A0B4J268 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV4A0A0B4J268 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV4A0A0B4J268 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV4A0A0B4J268 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV4A0A0B4J268 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV4A0A0B4J268 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV4A0A0B4J268 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV4A0A0B4J268 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV4A0A0B4J268 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV4A0A0B4J268 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV4A0A0B4J268 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV4A0A0B4J268 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC14.05□□□□□ -0.16
TRAV4A0A0B4J268 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
TRAV4A0A0B4J268 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TRAV4A0A0B4J268 TSPY6P-201ENST00000448518 926 ntBASIC14.05□□□□□ -0.16
TRAV4A0A0B4J268 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV4A0A0B4J268 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV4A0A0B4J268 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV4A0A0B4J268 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAV4A0A0B4J268 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV4A0A0B4J268 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAV4A0A0B4J268 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
TRAV4A0A0B4J268 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV4A0A0B4J268 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV4A0A0B4J268 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV4A0A0B4J268 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV4A0A0B4J268 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV4A0A0B4J268 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
TRAV4A0A0B4J268 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV4A0A0B4J268 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV4A0A0B4J268 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV4A0A0B4J268 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV4A0A0B4J268 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV4A0A0B4J268 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
TRAV4A0A0B4J268 AC116351.2-201ENST00000606540 1585 ntBASIC14.05□□□□□ -0.16
TRAV4A0A0B4J268 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV4A0A0B4J268 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV4A0A0B4J268 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TRAV4A0A0B4J268 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAV4A0A0B4J268 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV4A0A0B4J268 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV4A0A0B4J268 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV4A0A0B4J268 POLI-202ENST00000406285 2030 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAV4A0A0B4J268 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAV4A0A0B4J268 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TRAV4A0A0B4J268 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
TRAV4A0A0B4J268 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV4A0A0B4J268 GUSBP6-202ENST00000438529 1198 ntBASIC14.04□□□□□ -0.16
TRAV4A0A0B4J268 AC097658.1-201ENST00000475555 843 ntBASIC14.04□□□□□ -0.16
TRAV4A0A0B4J268 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV4A0A0B4J268 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV4A0A0B4J268 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAV4A0A0B4J268 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC14.04□□□□□ -0.16
TRAV4A0A0B4J268 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
TRAV4A0A0B4J268 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV4A0A0B4J268 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV4A0A0B4J268 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAV4A0A0B4J268 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV4A0A0B4J268 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV4A0A0B4J268 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TRAV4A0A0B4J268 AC018553.1-201ENST00000616682 1458 ntBASIC14.04□□□□□ -0.16
TRAV4A0A0B4J268 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAV4A0A0B4J268 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV4A0A0B4J268 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAV4A0A0B4J268 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV4A0A0B4J268 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV4A0A0B4J268 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV4A0A0B4J268 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms