Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-4A0A0B4J246 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV8-4A0A0B4J246 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-4A0A0B4J246 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV8-4A0A0B4J246 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC13.66□□□□□ -0.22
TRAV8-4A0A0B4J246 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-4A0A0B4J246 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-4A0A0B4J246 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TRAV8-4A0A0B4J246 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-4A0A0B4J246 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-4A0A0B4J246 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-4A0A0B4J246 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRAV8-4A0A0B4J246 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-4A0A0B4J246 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-4A0A0B4J246 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-4A0A0B4J246 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-4A0A0B4J246 AC006015.1-201ENST00000429970 570 ntBASIC13.66□□□□□ -0.22
TRAV8-4A0A0B4J246 AC069236.1-201ENST00000604339 616 ntBASIC13.66□□□□□ -0.22
TRAV8-4A0A0B4J246 AL356652.1-201ENST00000615962 565 ntBASIC13.66□□□□□ -0.22
TRAV8-4A0A0B4J246 BID-214ENST00000617586 542 ntTSL 5 BASIC13.66□□□□□ -0.22
TRAV8-4A0A0B4J246 AC008694.1-202ENST00000636953 945 ntBASIC13.66□□□□□ -0.22
TRAV8-4A0A0B4J246 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC13.66□□□□□ -0.22
TRAV8-4A0A0B4J246 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRAV8-4A0A0B4J246 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRAV8-4A0A0B4J246 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-4A0A0B4J246 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC13.66□□□□□ -0.22
TRAV8-4A0A0B4J246 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
TRAV8-4A0A0B4J246 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-4A0A0B4J246 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-4A0A0B4J246 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-4A0A0B4J246 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-4A0A0B4J246 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
TRAV8-4A0A0B4J246 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-4A0A0B4J246 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-4A0A0B4J246 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV8-4A0A0B4J246 AL162377.1-201ENST00000618844 1793 ntBASIC13.66□□□□□ -0.22
TRAV8-4A0A0B4J246 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC13.65□□□□□ -0.22
TRAV8-4A0A0B4J246 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
TRAV8-4A0A0B4J246 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-4A0A0B4J246 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-4A0A0B4J246 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC13.65□□□□□ -0.22
TRAV8-4A0A0B4J246 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-4A0A0B4J246 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC13.65□□□□□ -0.22
TRAV8-4A0A0B4J246 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-4A0A0B4J246 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-4A0A0B4J246 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-4A0A0B4J246 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-4A0A0B4J246 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-4A0A0B4J246 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-4A0A0B4J246 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-4A0A0B4J246 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-4A0A0B4J246 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC13.65□□□□□ -0.22
TRAV8-4A0A0B4J246 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC13.65□□□□□ -0.22
TRAV8-4A0A0B4J246 MFSD11-216ENST00000590393 1141 ntBASIC13.65□□□□□ -0.22
TRAV8-4A0A0B4J246 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-4A0A0B4J246 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-4A0A0B4J246 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TRAV8-4A0A0B4J246 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
TRAV8-4A0A0B4J246 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TRAV8-4A0A0B4J246 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC13.65□□□□□ -0.22
TRAV8-4A0A0B4J246 CYP21A1P-202ENST00000354927 1481 ntBASIC13.65□□□□□ -0.22
TRAV8-4A0A0B4J246 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC13.65□□□□□ -0.22
TRAV8-4A0A0B4J246 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-4A0A0B4J246 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-4A0A0B4J246 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-4A0A0B4J246 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV8-4A0A0B4J246 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV8-4A0A0B4J246 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV8-4A0A0B4J246 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV8-4A0A0B4J246 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV8-4A0A0B4J246 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV8-4A0A0B4J246 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV8-4A0A0B4J246 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TRAV8-4A0A0B4J246 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV8-4A0A0B4J246 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC13.64□□□□□ -0.23
TRAV8-4A0A0B4J246 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV8-4A0A0B4J246 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV8-4A0A0B4J246 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC13.64□□□□□ -0.23
TRAV8-4A0A0B4J246 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV8-4A0A0B4J246 MCRIP2P1-201ENST00000394346 511 ntBASIC13.64□□□□□ -0.23
TRAV8-4A0A0B4J246 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV8-4A0A0B4J246 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TRAV8-4A0A0B4J246 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV8-4A0A0B4J246 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC13.64□□□□□ -0.23
TRAV8-4A0A0B4J246 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV8-4A0A0B4J246 RARRES2P4-201ENST00000514074 484 ntBASIC13.64□□□□□ -0.23
TRAV8-4A0A0B4J246 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC13.64□□□□□ -0.23
TRAV8-4A0A0B4J246 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC13.64□□□□□ -0.23
TRAV8-4A0A0B4J246 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC13.64□□□□□ -0.23
TRAV8-4A0A0B4J246 AC011767.1-201ENST00000617410 1153 ntBASIC13.64□□□□□ -0.23
TRAV8-4A0A0B4J246 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV8-4A0A0B4J246 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV8-4A0A0B4J246 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV8-4A0A0B4J246 NOC2LP1-202ENST00000452600 2235 ntBASIC13.64□□□□□ -0.23
TRAV8-4A0A0B4J246 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV8-4A0A0B4J246 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV8-4A0A0B4J246 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV8-4A0A0B4J246 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV8-4A0A0B4J246 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV8-4A0A0B4J246 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 8.1 ms