Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC29.61■■■□□ 2.33
PTCH2Q9Y6C5 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
PTCH2Q9Y6C5 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
PTCH2Q9Y6C5 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC29.59■■■□□ 2.33
PTCH2Q9Y6C5 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
PTCH2Q9Y6C5 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
PTCH2Q9Y6C5 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC29.59■■■□□ 2.33
PTCH2Q9Y6C5 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
PTCH2Q9Y6C5 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
PTCH2Q9Y6C5 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
PTCH2Q9Y6C5 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC29.58■■■□□ 2.33
PTCH2Q9Y6C5 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC29.58■■■□□ 2.33
PTCH2Q9Y6C5 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC29.57■■■□□ 2.32
PTCH2Q9Y6C5 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
PTCH2Q9Y6C5 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
PTCH2Q9Y6C5 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC29.54■■■□□ 2.32
PTCH2Q9Y6C5 HES4-204ENST00000484667 667 ntTSL 3 BASIC29.54■■■□□ 2.32
PTCH2Q9Y6C5 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
PTCH2Q9Y6C5 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC29.54■■■□□ 2.32
PTCH2Q9Y6C5 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
PTCH2Q9Y6C5 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC29.52■■■□□ 2.32
PTCH2Q9Y6C5 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
PTCH2Q9Y6C5 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC29.52■■■□□ 2.32
PTCH2Q9Y6C5 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
PTCH2Q9Y6C5 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC29.51■■■□□ 2.32
PTCH2Q9Y6C5 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
PTCH2Q9Y6C5 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
PTCH2Q9Y6C5 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC29.5■■■□□ 2.31
PTCH2Q9Y6C5 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
PTCH2Q9Y6C5 AC120057.4-201ENST00000624722 1615 ntBASIC29.5■■■□□ 2.31
PTCH2Q9Y6C5 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC29.5■■■□□ 2.31
PTCH2Q9Y6C5 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
PTCH2Q9Y6C5 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC29.5■■■□□ 2.31
PTCH2Q9Y6C5 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC29.5■■■□□ 2.31
PTCH2Q9Y6C5 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC29.49■■■□□ 2.31
PTCH2Q9Y6C5 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC29.49■■■□□ 2.31
PTCH2Q9Y6C5 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC29.49■■■□□ 2.31
PTCH2Q9Y6C5 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
PTCH2Q9Y6C5 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
PTCH2Q9Y6C5 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
PTCH2Q9Y6C5 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC29.47■■■□□ 2.31
PTCH2Q9Y6C5 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
PTCH2Q9Y6C5 AC092296.2-201ENST00000589470 999 ntBASIC29.47■■■□□ 2.31
PTCH2Q9Y6C5 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
PTCH2Q9Y6C5 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
PTCH2Q9Y6C5 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
PTCH2Q9Y6C5 AL035685.1-201ENST00000636663 812 ntBASIC29.46■■■□□ 2.31
PTCH2Q9Y6C5 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC29.45■■■□□ 2.31
PTCH2Q9Y6C5 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC29.45■■■□□ 2.31
PTCH2Q9Y6C5 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC29.45■■■□□ 2.31
PTCH2Q9Y6C5 AC148477.6-201ENST00000623746 465 ntBASIC29.45■■■□□ 2.31
PTCH2Q9Y6C5 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
PTCH2Q9Y6C5 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC29.44■■■□□ 2.3
PTCH2Q9Y6C5 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
PTCH2Q9Y6C5 AL592295.1-201ENST00000400984 884 ntBASIC29.44■■■□□ 2.3
PTCH2Q9Y6C5 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC29.44■■■□□ 2.3
PTCH2Q9Y6C5 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
PTCH2Q9Y6C5 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
PTCH2Q9Y6C5 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC29.43■■■□□ 2.3
PTCH2Q9Y6C5 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC29.43■■■□□ 2.3
PTCH2Q9Y6C5 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
PTCH2Q9Y6C5 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
PTCH2Q9Y6C5 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC29.42■■■□□ 2.3
PTCH2Q9Y6C5 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC29.42■■■□□ 2.3
PTCH2Q9Y6C5 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC29.42■■■□□ 2.3
PTCH2Q9Y6C5 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
PTCH2Q9Y6C5 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
PTCH2Q9Y6C5 AC019069.1-201ENST00000610008 1333 ntBASIC29.42■■■□□ 2.3
PTCH2Q9Y6C5 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC29.41■■■□□ 2.3
PTCH2Q9Y6C5 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
PTCH2Q9Y6C5 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC29.41■■■□□ 2.3
PTCH2Q9Y6C5 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
PTCH2Q9Y6C5 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
PTCH2Q9Y6C5 AC010864.1-201ENST00000609407 1511 ntBASIC29.4■■■□□ 2.3
PTCH2Q9Y6C5 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
PTCH2Q9Y6C5 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC29.4■■■□□ 2.3
PTCH2Q9Y6C5 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC29.4■■■□□ 2.3
PTCH2Q9Y6C5 AL451085.2-201ENST00000605085 799 ntBASIC29.39■■■□□ 2.3
PTCH2Q9Y6C5 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
PTCH2Q9Y6C5 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC29.39■■■□□ 2.29
PTCH2Q9Y6C5 WHAMMP2-203ENST00000563942 1603 ntBASIC29.38■■■□□ 2.29
PTCH2Q9Y6C5 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC29.38■■■□□ 2.29
PTCH2Q9Y6C5 MTURN-203ENST00000409688 843 ntTSL 2 BASIC29.38■■■□□ 2.29
PTCH2Q9Y6C5 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC29.38■■■□□ 2.29
PTCH2Q9Y6C5 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC29.38■■■□□ 2.29
PTCH2Q9Y6C5 ECEL1P2-201ENST00000461596 1295 ntBASIC29.37■■■□□ 2.29
PTCH2Q9Y6C5 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
PTCH2Q9Y6C5 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC29.36■■■□□ 2.29
PTCH2Q9Y6C5 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
PTCH2Q9Y6C5 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
PTCH2Q9Y6C5 TRIR-205ENST00000592273 783 ntTSL 3 BASIC29.35■■■□□ 2.29
PTCH2Q9Y6C5 AL161658.1-201ENST00000623641 1967 ntBASIC29.35■■■□□ 2.29
PTCH2Q9Y6C5 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
PTCH2Q9Y6C5 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC29.34■■■□□ 2.29
PTCH2Q9Y6C5 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
PTCH2Q9Y6C5 AC110285.7-201ENST00000624417 1536 ntBASIC29.34■■■□□ 2.29
PTCH2Q9Y6C5 AC135983.2-203ENST00000454486 1613 ntBASIC29.34■■■□□ 2.29
PTCH2Q9Y6C5 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
PTCH2Q9Y6C5 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
PTCH2Q9Y6C5 DUX4L18-201ENST00000553347 1267 ntBASIC29.33■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms