Protein–RNA interactions for Protein: Q9NZI6

TFCP2L1, Transcription factor CP2-like protein 1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2L1Q9NZI6 AC120057.4-201ENST00000624722 1615 ntBASIC33.28■■■□□ 2.92
TFCP2L1Q9NZI6 CHST11-203ENST00000547956 936 ntTSL 2 BASIC33.28■■■□□ 2.92
TFCP2L1Q9NZI6 AC060814.1-201ENST00000554326 538 ntBASIC33.28■■■□□ 2.92
TFCP2L1Q9NZI6 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
TFCP2L1Q9NZI6 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC33.27■■■□□ 2.92
TFCP2L1Q9NZI6 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC33.27■■■□□ 2.92
TFCP2L1Q9NZI6 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.92
TFCP2L1Q9NZI6 GUK1-208ENST00000366728 842 ntTSL 2 BASIC33.26■■■□□ 2.91
TFCP2L1Q9NZI6 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC33.26■■■□□ 2.91
TFCP2L1Q9NZI6 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC33.26■■■□□ 2.91
TFCP2L1Q9NZI6 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
TFCP2L1Q9NZI6 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC33.25■■■□□ 2.91
TFCP2L1Q9NZI6 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC33.25■■■□□ 2.91
TFCP2L1Q9NZI6 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC33.25■■■□□ 2.91
TFCP2L1Q9NZI6 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
TFCP2L1Q9NZI6 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
TFCP2L1Q9NZI6 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
TFCP2L1Q9NZI6 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
TFCP2L1Q9NZI6 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC33.23■■■□□ 2.91
TFCP2L1Q9NZI6 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC33.22■■■□□ 2.91
TFCP2L1Q9NZI6 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
TFCP2L1Q9NZI6 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
TFCP2L1Q9NZI6 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
TFCP2L1Q9NZI6 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
TFCP2L1Q9NZI6 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC33.2■■■□□ 2.91
TFCP2L1Q9NZI6 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC33.2■■■□□ 2.91
TFCP2L1Q9NZI6 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC33.2■■■□□ 2.9
TFCP2L1Q9NZI6 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
TFCP2L1Q9NZI6 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
TFCP2L1Q9NZI6 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC33.19■■■□□ 2.9
TFCP2L1Q9NZI6 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
TFCP2L1Q9NZI6 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
TFCP2L1Q9NZI6 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
TFCP2L1Q9NZI6 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
TFCP2L1Q9NZI6 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC33.16■■■□□ 2.9
TFCP2L1Q9NZI6 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
TFCP2L1Q9NZI6 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
TFCP2L1Q9NZI6 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
TFCP2L1Q9NZI6 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC33.13■■■□□ 2.89
TFCP2L1Q9NZI6 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC33.13■■■□□ 2.89
TFCP2L1Q9NZI6 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC33.13■■■□□ 2.89
TFCP2L1Q9NZI6 AC010864.1-201ENST00000609407 1511 ntBASIC33.12■■■□□ 2.89
TFCP2L1Q9NZI6 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
TFCP2L1Q9NZI6 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
TFCP2L1Q9NZI6 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC33.1■■■□□ 2.89
TFCP2L1Q9NZI6 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC33.1■■■□□ 2.89
TFCP2L1Q9NZI6 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC33.1■■■□□ 2.89
TFCP2L1Q9NZI6 AL161658.1-201ENST00000623641 1967 ntBASIC33.1■■■□□ 2.89
TFCP2L1Q9NZI6 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
TFCP2L1Q9NZI6 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
TFCP2L1Q9NZI6 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC33.09■■■□□ 2.89
TFCP2L1Q9NZI6 AC148477.6-201ENST00000623746 465 ntBASIC33.09■■■□□ 2.89
TFCP2L1Q9NZI6 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC33.09■■■□□ 2.89
TFCP2L1Q9NZI6 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC33.08■■■□□ 2.89
TFCP2L1Q9NZI6 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC33.08■■■□□ 2.89
TFCP2L1Q9NZI6 HES4-204ENST00000484667 667 ntTSL 3 BASIC33.08■■■□□ 2.89
TFCP2L1Q9NZI6 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC33.08■■■□□ 2.89
TFCP2L1Q9NZI6 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC33.08■■■□□ 2.89
TFCP2L1Q9NZI6 AC092296.2-201ENST00000589470 999 ntBASIC33.07■■■□□ 2.88
TFCP2L1Q9NZI6 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
TFCP2L1Q9NZI6 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
TFCP2L1Q9NZI6 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC33.06■■■□□ 2.88
TFCP2L1Q9NZI6 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
TFCP2L1Q9NZI6 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
TFCP2L1Q9NZI6 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC33.05■■■□□ 2.88
TFCP2L1Q9NZI6 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
TFCP2L1Q9NZI6 WHAMMP2-203ENST00000563942 1603 ntBASIC33.04■■■□□ 2.88
TFCP2L1Q9NZI6 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
TFCP2L1Q9NZI6 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
TFCP2L1Q9NZI6 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC33.03■■■□□ 2.88
TFCP2L1Q9NZI6 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
TFCP2L1Q9NZI6 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
TFCP2L1Q9NZI6 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC33.01■■■□□ 2.87
TFCP2L1Q9NZI6 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC33.01■■■□□ 2.87
TFCP2L1Q9NZI6 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC33.01■■■□□ 2.87
TFCP2L1Q9NZI6 AC110285.7-201ENST00000624417 1536 ntBASIC33.01■■■□□ 2.87
TFCP2L1Q9NZI6 AC135983.2-203ENST00000454486 1613 ntBASIC33■■■□□ 2.87
TFCP2L1Q9NZI6 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
TFCP2L1Q9NZI6 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC33■■■□□ 2.87
TFCP2L1Q9NZI6 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC33■■■□□ 2.87
TFCP2L1Q9NZI6 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC32.99■■■□□ 2.87
TFCP2L1Q9NZI6 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
TFCP2L1Q9NZI6 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
TFCP2L1Q9NZI6 ECEL1P2-201ENST00000461596 1295 ntBASIC32.99■■■□□ 2.87
TFCP2L1Q9NZI6 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC32.99■■■□□ 2.87
TFCP2L1Q9NZI6 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
TFCP2L1Q9NZI6 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
TFCP2L1Q9NZI6 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
TFCP2L1Q9NZI6 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
TFCP2L1Q9NZI6 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC32.97■■■□□ 2.87
TFCP2L1Q9NZI6 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
TFCP2L1Q9NZI6 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC32.97■■■□□ 2.87
TFCP2L1Q9NZI6 AL035685.1-201ENST00000636663 812 ntBASIC32.97■■■□□ 2.87
TFCP2L1Q9NZI6 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC32.96■■■□□ 2.87
TFCP2L1Q9NZI6 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC32.96■■■□□ 2.87
TFCP2L1Q9NZI6 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC32.96■■■□□ 2.87
TFCP2L1Q9NZI6 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
TFCP2L1Q9NZI6 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC32.96■■■□□ 2.87
TFCP2L1Q9NZI6 MIR219A2-201ENST00000608502 1504 ntBASIC32.96■■■□□ 2.87
TFCP2L1Q9NZI6 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.86
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms